G858928


Basic Information

Item Value
gene id G858928
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 15820458 ~ 15821201 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU978774
gtatagtgtgtgtgtggcaggcttacaatgatggctaaaaacaacatttgagagtgcgctgaccctggtgctagagggggtacgcagctggaggttgaatgtttgaaggggtacgggactatgaaaagtttgggaaccactgccttaggagaaccctttttgggttccatgtataaccctttgtggaaagggttttacatggaaccctaAAGGGTTCtagctggaaccaaaaagggttcttcaaagggttcttctatggggacagatgAAGAACCCTcataggttctagatagcaccgtttttttttgtgtggacaATGTTTAAGAGTTTCTTACTGGACAATTCCAGGTAGTCATTCCCTGTTCCAGTCCATTTTCTtacatttggtgcctaatgaaatAAACATGACGACGTACTTTTGTTAGCAATAGCGCACCGAGTTGCACTAGTTATGAGAGGCTTACCGAAGACTCAGGACAGGAACAACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU978774 True 488 lncRNA 0.44 2 15820458 15821201

Neighbor

gene id symbol gene type direction distance location
sar1a sar1a coding downstream 321322 15491003 ~ 15499136 (-)
LOC110533385 LOC106603813 coding downstream 631576 15187394 ~ 15188882 (-)
LOC110534908 LOC106603812 coding downstream 649263 15157675 ~ 15171195 (-)
LOC110533384 LOC106603816 coding downstream 666185 15140812 ~ 15154273 (-)
LOC110533383 skp1 coding downstream 680804 15129962 ~ 15139654 (-)
LOC110534856 LOC106603798 coding upstream 197337 16018538 ~ 16057861 (-)
LOC110533417 snrpd2 coding upstream 244050 16065251 ~ 16068108 (-)
LOC110533418 LOC106603795 coding upstream 258429 16079630 ~ 16088437 (-)
LOC110533420 LOC106603794 coding upstream 272714 16093915 ~ 16117060 (-)
LOC110533421 LOC106603793 coding upstream 320117 16141284 ~ 16185730 (-)
G858832 NA non-coding downstream 140450 15679616 ~ 15680008 (-)
G858833 NA non-coding downstream 145203 15674751 ~ 15675255 (-)
G858831 NA non-coding downstream 146524 15673536 ~ 15673934 (-)
G858823 sytl2 non-coding downstream 158327 15660843 ~ 15662131 (-)
G858811 NA non-coding downstream 188063 15631851 ~ 15632395 (-)
G858945 NA non-coding upstream 21480 15842681 ~ 15843627 (-)
G858963 NA non-coding upstream 48335 15869536 ~ 15900725 (-)
G859002 NA non-coding upstream 93789 15914990 ~ 15919870 (-)
G859035 NA non-coding upstream 172102 15993303 ~ 16047932 (-)
G859272 NA non-coding upstream 300246 16121447 ~ 16125648 (-)
G858015 NA other downstream 702429 15117422 ~ 15118029 (-)
LOC110533380 LOC106603823 other downstream 1247554 14557109 ~ 14794250 (-)
G856863 LOC106603829 other downstream 1610076 14203533 ~ 14210382 (-)
G856872 NA other downstream 1613242 14205272 ~ 14207216 (-)
G856922 NA other downstream 1635484 14184287 ~ 14184974 (-)
G859594 NA other upstream 635347 16456548 ~ 16456847 (-)
LOC110533434 LOC106603775 other upstream 1701060 17520259 ~ 17545622 (-)
G862071 tmem132e other upstream 2580294 18401495 ~ 18405409 (-)

Expression


Co-expression Network