XLOC_002782 (si:ch211-214k5.3)


Basic Information

Item Value
gene id XLOC_002782
gene name si:ch211-214k5.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 24959246 ~ 24961310 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005150
TTTACTTCATTTCTTCAGAGAAGAAGAACTGGTCTGAGAGCAGAAGATACTGTAGAGACAGAGGACCAGATCTCATCATCATAAACAACAAAGAAGAACAAgaaTATTTTAATGCAATATCTGGTGGCACTGCGTTTTGGATTGGTCTGACTGACAGTGATGAAGAGGGCAGTTGGAAATGGGTTGATGGCAGCAACATGACCACTGGAGCCCAATGGACAAAGAGGAGAGAAAGAACTGTGCTGTATCTTATTCTTCAGGATGGGTCGATTATCCATGTAATGACTATTTTCAGTGGATCTGTGAGAAAAGAGCACTTAAAAAAGTCATTAAGTTGTATTTTTGTTCATGCTGTAAATTACATGCAACAT

Function

GO:

id name namespace
GO:0030246 carbohydrate binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041210-206 No description available

Ensembl:

ensembl_id ENSDARG00000102034

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005150 True 371 mRNA 0.39 3 24959246 24961310

Neighbor

gene id symbol gene type direction distance location
XLOC_002781 si:ch211-214k5.3 coding downstream 22176 24935765 ~ 24937070 (-)
XLOC_002780 CABZ01058107.1 coding downstream 90665 24865535 ~ 24868581 (-)
XLOC_002779 NA coding downstream 106721 24833696 ~ 24852525 (-)
XLOC_002778 si:ch1073-15f19.2 coding downstream 174800 24778289 ~ 24784446 (-)
XLOC_002777 timm10b coding downstream 193258 24762216 ~ 24765988 (-)
XLOC_002783 cd209 coding upstream 10163 24971473 ~ 25028527 (-)
XLOC_002784 mtnr1bb coding upstream 74149 25035459 ~ 25069207 (-)
XLOC_002785 fat3b coding upstream 147543 25108853 ~ 25204034 (-)
XLOC_002786 kpna7 coding upstream 252960 25214270 ~ 25217347 (-)
XLOC_002787 tmem135 coding upstream 351027 25312337 ~ 25343521 (-)
XLOC_002772 NA non-coding downstream 331808 24613973 ~ 24627438 (-)
XLOC_002771 AL929315.2 non-coding downstream 503514 24455616 ~ 24455732 (-)
XLOC_002770 AL929315.1 non-coding downstream 513254 24439620 ~ 24445992 (-)
XLOC_002768 CU467963.2 non-coding downstream 575865 24383266 ~ 24383381 (-)
XLOC_002788 NA non-coding upstream 419688 25380998 ~ 25390673 (-)
XLOC_002790 NA non-coding upstream 532863 25494173 ~ 25499474 (-)
XLOC_002792 NA non-coding upstream 725591 25686901 ~ 25687218 (-)
XLOC_002793 NA non-coding upstream 729562 25690872 ~ 25691670 (-)
XLOC_002802 NA non-coding upstream 1479742 26441052 ~ 26447171 (-)

Expression


Co-expression Network