Gene
RNA
| Item | Value |
|---|---|
| gene id | G868782 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 23741743 ~ 23742819 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU989357 | True | 1077 | lncRNA | 0.39 | 1 | 23741743 | 23742819 |
23,739,600
23,740,000
23,740,400
23,740,800
23,741,200
23,741,600
23,742,000
23,742,400
23,742,800
23,743,200
23,743,600
23,744,000
23,744,400
23,744,800
23,745,200
23,745,600
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533526 | LOC106603674 | coding | downstream | 348418 | 23348350 ~ 23393325 (-) |
| LOC110533524 | vps26b | coding | downstream | 425985 | 23308431 ~ 23315758 (-) |
| LOC110533523 | LOC106603671 | coding | downstream | 448863 | 23269923 ~ 23292880 (-) |
| LOC110533520 | LOC106603666 | coding | downstream | 626400 | 22873256 ~ 23115343 (-) |
| LOC110533517 | LOC106603668 | coding | downstream | 936370 | 22686425 ~ 22805373 (-) |
| LOC110534869 | LOC106603642 | coding | upstream | 423332 | 24166151 ~ 24669067 (-) |
| LOC110534871 | LOC106567726 | coding | upstream | 1879108 | 25621927 ~ 25634699 (-) |
| mybbp1a | LOC106603631 | coding | upstream | 2070812 | 25813631 ~ 25834759 (-) |
| rfc2 | rfc2 | coding | upstream | 2115516 | 25858335 ~ 25865920 (-) |
| LOC110533542 | LOC106603436 | coding | upstream | 2267902 | 26010721 ~ 26033162 (-) |
| G868779 | NA | non-coding | downstream | 5145 | 23736302 ~ 23736598 (-) |
| G868778 | NA | non-coding | downstream | 6575 | 23734771 ~ 23735168 (-) |
| G868777 | NA | non-coding | downstream | 7442 | 23733884 ~ 23734301 (-) |
| G868668 | NA | non-coding | downstream | 160644 | 23580362 ~ 23581099 (-) |
| G868453 | NA | non-coding | downstream | 266098 | 23468277 ~ 23475645 (-) |
| G868785 | NA | non-coding | upstream | 3884 | 23746703 ~ 23746932 (-) |
| G868787 | NA | non-coding | upstream | 4964 | 23747783 ~ 23748013 (-) |
| G868789 | NA | non-coding | upstream | 7649 | 23750468 ~ 23750695 (-) |
| G868790 | NA | non-coding | upstream | 8184 | 23751003 ~ 23751204 (-) |
| G868791 | NA | non-coding | upstream | 9368 | 23752187 ~ 23752614 (-) |
| G866654 | NA | other | downstream | 1918122 | 21819111 ~ 21823621 (-) |
| G865988 | LOC106578276 | other | downstream | 1981891 | 21759124 ~ 21759852 (-) |
| G865899 | cssa04h11orf63 | other | downstream | 2048546 | 21691763 ~ 21693197 (-) |
| G863863 | NA | other | downstream | 3881132 | 19859070 ~ 19860611 (-) |
| G862927 | NA | other | downstream | 4714165 | 19025342 ~ 19027578 (-) |
| LOC110533569 | LOC106567674 | other | upstream | 3147206 | 26890009 ~ 26911668 (-) |
| G873209 | orai2 | other | upstream | 3420081 | 27162900 ~ 27164550 (-) |
| LOC110533580 | tex14 | other | upstream | 3609574 | 27330589 ~ 27366556 (-) |
| G873784 | LOC106573797 | other | upstream | 3840110 | 27582929 ~ 27584262 (-) |
| G874706 | NA | other | upstream | 4797410 | 28540229 ~ 28543267 (-) |
