Gene
RNA
| Item | Value |
|---|---|
| gene id | G871517 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 26884230 ~ 26884533 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU992297 | True | 304 | lncRNA | 0.48 | 1 | 26884230 | 26884533 |
26,881,200
26,881,600
26,882,000
26,882,400
26,882,800
26,883,200
26,883,600
26,884,000
26,884,400
26,884,800
26,885,200
26,885,600
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534876 | LOC106603451 | coding | upstream | 24164 | 26848371 ~ 26860066 (+) |
| LOC110533562 | ets2 | coding | upstream | 179004 | 26695865 ~ 26705226 (+) |
| LOC110533561 | LOC106603448 | coding | upstream | 276118 | 26603368 ~ 26608112 (+) |
| LOC110533558 | dyrk1a | coding | upstream | 460794 | 26368145 ~ 26423436 (+) |
| LOC118966723 | ripply3 | coding | upstream | 526796 | 26344617 ~ 26357434 (+) |
| LOC110534877 | mis12 | coding | downstream | 44153 | 26928686 ~ 26929652 (+) |
| LOC110533570 | LOC106603454 | coding | downstream | 104771 | 26989304 ~ 27057288 (+) |
| alkbh4 | alkbh4 | coding | downstream | 214676 | 27099209 ~ 27100767 (+) |
| lrwd1 | lrwd1 | coding | downstream | 230713 | 27115246 ~ 27126907 (+) |
| bckdk | LOC106603456 | coding | downstream | 243385 | 27127918 ~ 27159525 (+) |
| G871464 | NA | non-coding | upstream | 86320 | 26797697 ~ 26797910 (+) |
| G871423 | psmg1 | non-coding | upstream | 119858 | 26757492 ~ 26764372 (+) |
| G871437 | NA | non-coding | upstream | 130172 | 26753450 ~ 26754058 (+) |
| G871419 | NA | non-coding | upstream | 162798 | 26719808 ~ 26721432 (+) |
| G871333 | NA | non-coding | upstream | 299506 | 26584495 ~ 26584724 (+) |
| G871518 | NA | non-coding | downstream | 1168 | 26885701 ~ 26886071 (+) |
| G871519 | NA | non-coding | downstream | 2039 | 26886572 ~ 26886949 (+) |
| G871514 | LOC107600784 | non-coding | downstream | 20722 | 26905255 ~ 26906037 (+) |
| G871627 | NA | non-coding | downstream | 173667 | 27058200 ~ 27060412 (+) |
| G871629 | NA | non-coding | downstream | 178900 | 27063433 ~ 27063703 (+) |
| ypel2a | LOC106603438 | other | upstream | 787430 | 26079908 ~ 26096800 (+) |
| G870863 | NA | other | upstream | 1058842 | 25820346 ~ 25825388 (+) |
| LOC110534872 | LOC107603288 | other | upstream | 1192536 | 25688669 ~ 25794691 (+) |
| LOC110533530 | LOC106603640 | other | upstream | 1530955 | 25057727 ~ 25379589 (+) |
| ap2b1 | ap2b1 | other | downstream | 377223 | 27177610 ~ 27268794 (+) |
| ppm1e | ppm1e | other | downstream | 608200 | 27409651 ~ 27496872 (+) |
| G874108 | pgk | other | downstream | 1205373 | 28089906 ~ 28117360 (+) |
| LOC110533598 | LOC106603479 | other | downstream | 1278294 | 28162794 ~ 28171287 (+) |
| G874438 | LOC106603484 | other | downstream | 1672007 | 28556540 ~ 28557644 (+) |
