G873209 (orai2)


Basic Information

Item Value
gene id G873209
gene name orai2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 27162900 ~ 27164550 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU994124
CGtcgaacacaactgcattttatcaatggcaatttcaatgcacagagataccgtgacgagatcctgaggcccattgttttgCCATTACtttgccgccatcacctcatgtttcagcatgataatgcatggctcCATGCCACAAGGACCTGTGCACaattcctggatgctgaaaatgtcccagctcTTCCTTGGCCTacatactcagacatgtcacccattgagcatgttcgggATGCTATGTATCGACATATAAGACTGTgctatccagcaacttcgcacagccatttaAGAGTGAGACAACATTACACAGGCAACAATCAACAGCCCAATCAACTCTATgcgtatatgtgaccaacagatgtatctccgtattcccagtcatgtgaaatccatagatttgggcctaatgaatttatttcaattgactgatttccttctatgaattgtaactttgaaattgttgcatgttgtgtttatattttttgttcagtgtacattacaCACTGTTTGGTGCAGCATTAACaccttaaaaaataaatggaCTTTTGTTTCCACCTGCTTCTGCATCTGCTTACAACTCTGGTCTCAGTGTTGATCATAGCCTGACAACAATAACAGCCTTGTGAGAACAAGTTAAGCACATGTGAGGGTTGACACCACTTCCTTAATGAAATGTGGAGATGACACAAAACTACTAACAAAATAGCCCTTTAAAATAATCTTTAAAAATATAATCAATACATCTCTCAAGGAGACAAGATACTATTTTCCAAATCAAACAAACATACTATGAACTTTGACCTCCATAATTTGGTAGAGCTGAGAATTCCTTAAACTTCCCACATATTAAGTGGAGTTTTGGGGCTCTCTGCCAAAAAAACTTTAAGGAAGACATTAACAATGAACAGGCTAGAGGCTGAATAAGAAAGGGTGCTTGATAAATAGGGGATAAGGAAATCCTTAATCATCCCACTTATTCAGTGGAATTTTGGTGCTTCTCAACAATGTGAGAAGGCATTGACAGTGGACAGGAAGAGCATAGAGAGAAGAGCTAAAGAGATCACACTGCCTGTAGGCCTCTCTCGCACCCGTCCAGCAGCACCTTAATTTTGTGCAGTTCCTCAATCTCCTGGTGGTGGCGCTCTGTCTTGTGGCTCACCAGCGAGCGGTAGAAGTGGATGGTGAATACCACAAAGATAACCCCCACCGGCACCATGATGATGGTGGAGGCCAGGGCTGCCTGCCAGCCACTGTGCCCTGGCGGAGGGGTGGGCTTGGGTGGCAGGGCGGGGCCGCTACAGTTCAGCTTGGATAGTGCCAGCTCTGCGGCAGCCACCGCCACCTGGTTGGCGGAACTAGAGTCCACGGGCAGGAACTTGATCCAGCAGAGCAGCACTACCTCTGCCAGGAAAAGCAGGATGCCCAGGGCAGTGGAGAAGCCCCAGGCCAGCTCGATGTAGTGGTGCATGCGCTCATGGGGTGACTCGCTGACTGAGTTGAGGTTGTGGATATTGCTGACTGCCTCCACGTTGGGTAGGATGCAGGTGCTGATGAGCAGGGCGAGCAGGTGCACAGACACCAGCACCGTAGTACAAACGCTAAAGGCAATGAGGAGCATTTGTGGGTAGTTGTACTGGATCTCCAACTGGAC
>TU994126
CGtcgaacacaactgcattttatcaatggcaatttcaatgcacagagataccgtgacgagatcctgaggcccattgttttgCCATTACtttgccgccatcacctcatgtttcagcatgataatgcatggctcCATGCCACAAGGACCTGTGCACaattcctggatgctgaaaatgtcccagctcTTCCTTGGCCTacatactcagacatgtcacccattgagcatgttcgggATGCTATGTATCGACATATAAGACTGTgctatccagcaacttcgcacagccatttaAGAGTGAGACAACATTACACAGGCAACAATCAACAGCCCAATCAACTCTATgcgtatatgtgaccaacagatgtatctccgtattcccagtcatgtgaaatccat
>TU994132
CGtcgaacacaactgcattttatcaatggcaatttcaatgcacagagataccgtgacgagatcctgaggcccattgttttgCCATTACtttgccgccatcacctcatgtttcagcatgataatgcatggctcCATGCCACAAGGACCTGTGCACaattcctggatgctgaaaatgtcccagctcTTCCTTGGCCTacatactcagacatgtcacccattgagcatgttcgggATGCTATGTATCGACATATAAGACTGTgctatccagcaacttcgcacagccatttaAGAGTGAGACAACATTACACAGGCAACAATCAACAGCCCA

Function

symbol description
orai2 Predicted to enable store-operated calcium channel activity. Predicted to be involved in store-operated calcium entry. Predicted to be integral component of membrane. Predicted to be active in membrane. Is expressed in several structures, including brain; head; liver; pleuroperitoneal region; and skeletal muscle. Orthologous to human ORAI2 (ORAI calcium release-activated calcium modulator 2).

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU994124 False 1651 TUCP 0.46 1 27162900 27164550
TU994126 False 393 lncRNA 0.45 1 27164158 27164550
TU994132 True 328 lncRNA 0.46 1 27164223 27164550
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Neighbor

gene id symbol gene type direction distance location
LOC110533573 NA coding downstream 69456 27092272 ~ 27094702 (-)
LOC110533571 LOC106567671 coding downstream 82418 27058163 ~ 27081740 (-)
LOC110533569 LOC106567674 coding downstream 252490 26890009 ~ 26911668 (-)
LOC110533566 LOC106603450 coding downstream 281717 26859873 ~ 26882441 (-)
LOC110533567 vps37d coding downstream 316274 26806114 ~ 26847884 (-)
pex12 pex12 coding upstream 10380 27174930 ~ 27178687 (-)
LOC110533581 gas2l2 coding upstream 125407 27289957 ~ 27305561 (-)
LOC110533583 LOC100196673 coding upstream 141321 27305871 ~ 27311822 (-)
LOC110533580 tex14 coding upstream 166039 27330589 ~ 27366556 (-)
LOC110534878 trim37 coding upstream 335044 27499594 ~ 27539649 (-)
G873208 LOC106567668 non-coding downstream 1518 27162347 ~ 27162640 (-)
G873207 NA non-coding downstream 1859 27162047 ~ 27162299 (-)
G873206 NA non-coding downstream 2455 27160990 ~ 27161703 (-)
G873194 lrwd1 non-coding downstream 45295 27117632 ~ 27118863 (-)
G873189 NA non-coding downstream 51667 27112238 ~ 27112491 (-)
G873192 NA non-coding upstream 3488 27168038 ~ 27168790 (-)
G873191 NA non-coding upstream 8594 27173144 ~ 27173522 (-)
G873271 NA non-coding upstream 135054 27299604 ~ 27299941 (-)
G873273 NA non-coding upstream 136838 27301388 ~ 27301638 (-)
G873281 NA non-coding upstream 153982 27318532 ~ 27376257 (-)
G866654 NA other downstream 5340537 21819111 ~ 21823621 (-)
G865988 LOC106578276 other downstream 5404306 21759124 ~ 21759852 (-)
G865899 cssa04h11orf63 other downstream 5470961 21691763 ~ 21693197 (-)
G863863 NA other downstream 7303547 19859070 ~ 19860611 (-)
G873784 LOC106573797 other upstream 418379 27582929 ~ 27584262 (-)
G874706 NA other upstream 1375679 28540229 ~ 28543267 (-)
G875194 NA other upstream 1776690 28941240 ~ 28985070 (-)
LOC110533621 NA other upstream 2750817 29906094 ~ 29922728 (-)

Expression

G873209(orai2) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 4.
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G873209(orai2) Expression in each Bioproject

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G873209(orai2) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network