G873192


Basic Information

Item Value
gene id G873192
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 27168038 ~ 27168790 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU994104
tctctctgtgggtctaaccccaagaagttctggaaaacagttaaagacctggagaataaaccctcctcctcacagctgcccatgtcccttaatgttgatgatgttactgtaaagaagcacatggctgaggtctaatcaccacttcattaagccAGGATTCCTATTTGTCTCACCATGCCTCTTTGCcgacatttcctcatctcccaccccttctaatgtgactatccccaatgtttctccctctttttcccctgccccgctacaaagtttctccttgcaggcagtcactgagtccgaggtgctaaaggaccTTCTGAAACttcaccccaaaaaaacatctgtgtCAGATGGTTTAAACCCTTTCTTCTtcaaggttgctgcccctatcatcgccaagtctctctcctttctgggaaGGTAGCCACGGTTTGTACTTtatttaaaagggggagatcttggcctatttctatttttccccgtttatcaaaagtgttggaaaaacttgtcaatcaactgactggctttcttgatgtctatagtattctctctggtatgcaatctggtttccgctcaggttatggatgtgtcacatcaaccttaaaggtcctcaatgtcgtcaccattgcccttgattctaagccaTGTTcttctgctatttttattgacttggccaaagcttttggtatggtagaccattccattcttgtgggccggctaaggagtattggtgtctttggcctggtttgctaacta

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU994104 True 753 lncRNA 0.45 1 27168038 27168790

Neighbor

gene id symbol gene type direction distance location
LOC110533573 NA coding downstream 73336 27092272 ~ 27094702 (-)
LOC110533571 LOC106567671 coding downstream 86298 27058163 ~ 27081740 (-)
LOC110533569 LOC106567674 coding downstream 256370 26890009 ~ 26911668 (-)
LOC110533566 LOC106603450 coding downstream 285597 26859873 ~ 26882441 (-)
LOC110533567 vps37d coding downstream 320154 26806114 ~ 26847884 (-)
pex12 pex12 coding upstream 6140 27174930 ~ 27178687 (-)
LOC110533581 gas2l2 coding upstream 121167 27289957 ~ 27305561 (-)
LOC110533583 LOC100196673 coding upstream 137081 27305871 ~ 27311822 (-)
LOC110533580 tex14 coding upstream 161799 27330589 ~ 27366556 (-)
LOC110534878 trim37 coding upstream 330804 27499594 ~ 27539649 (-)
G873209 orai2 non-coding downstream 3488 27162900 ~ 27164550 (-)
G873208 LOC106567668 non-coding downstream 5398 27162347 ~ 27162640 (-)
G873207 NA non-coding downstream 5739 27162047 ~ 27162299 (-)
G873206 NA non-coding downstream 6335 27160990 ~ 27161703 (-)
G873194 lrwd1 non-coding downstream 49175 27117632 ~ 27118863 (-)
G873191 NA non-coding upstream 4354 27173144 ~ 27173522 (-)
G873271 NA non-coding upstream 130814 27299604 ~ 27299941 (-)
G873273 NA non-coding upstream 132598 27301388 ~ 27301638 (-)
G873281 NA non-coding upstream 149742 27318532 ~ 27376257 (-)
G873297 NA non-coding upstream 166054 27334844 ~ 27336456 (-)
G866654 NA other downstream 5344417 21819111 ~ 21823621 (-)
G865988 LOC106578276 other downstream 5408186 21759124 ~ 21759852 (-)
G865899 cssa04h11orf63 other downstream 5474841 21691763 ~ 21693197 (-)
G873784 LOC106573797 other upstream 414139 27582929 ~ 27584262 (-)
G874706 NA other upstream 1371439 28540229 ~ 28543267 (-)
G875194 NA other upstream 1772450 28941240 ~ 28985070 (-)
LOC110533621 NA other upstream 2746577 29906094 ~ 29922728 (-)

Expression

G873192 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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G873192 Expression in each Bioproject

Bar chart with 16 bars.
G873192 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
End of interactive chart.

Co-expression Network