Gene
RNA
| Item | Value |
|---|---|
| gene id | G871686 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 27178249 ~ 27178653 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| peroxisome assembly protein 12 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU992482 | True | 405 | lncRNA | 0.44 | 1 | 27178249 | 27178653 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| orai2 | orai2 | coding | upstream | 14156 | 27159949 ~ 27164093 (+) |
| bckdk | LOC106603456 | coding | upstream | 18724 | 27127918 ~ 27159525 (+) |
| lrwd1 | lrwd1 | coding | upstream | 51342 | 27115246 ~ 27126907 (+) |
| alkbh4 | alkbh4 | coding | upstream | 77482 | 27099209 ~ 27100767 (+) |
| LOC110533570 | LOC106603454 | coding | upstream | 120961 | 26989304 ~ 27057288 (+) |
| LOC110533579 | rasl10b | coding | downstream | 93674 | 27272327 ~ 27287705 (+) |
| LOC110533584 | ska2 | coding | downstream | 131016 | 27309669 ~ 27330584 (+) |
| LOC110533582 | rad51c | coding | downstream | 187935 | 27366588 ~ 27396718 (+) |
| ppm1e | ppm1e | coding | downstream | 230998 | 27409651 ~ 27496872 (+) |
| LOC110533592 | LOC106568026 | coding | downstream | 701739 | 27880392 ~ 27888907 (+) |
| G871672 | NA | non-coding | upstream | 5487 | 27172283 ~ 27172762 (+) |
| G871675 | NA | non-coding | upstream | 6951 | 27170338 ~ 27171298 (+) |
| G871670 | NA | non-coding | upstream | 9250 | 27167620 ~ 27168999 (+) |
| G871673 | NA | non-coding | upstream | 11686 | 27165899 ~ 27166563 (+) |
| G871697 | NA | non-coding | downstream | 21815 | 27200468 ~ 27259719 (+) |
| G871725 | NA | non-coding | downstream | 90314 | 27268967 ~ 27269446 (+) |
| G871726 | NA | non-coding | downstream | 91407 | 27270060 ~ 27270267 (+) |
| G871727 | NA | non-coding | downstream | 91971 | 27270624 ~ 27270840 (+) |
| G871685 | LOC106613431 | non-coding | downstream | 114325 | 27292978 ~ 27294505 (+) |
| LOC110534876 | LOC106603451 | other | upstream | 319146 | 26848371 ~ 26860066 (+) |
| ypel2a | LOC106603438 | other | upstream | 1081449 | 26079908 ~ 26096800 (+) |
| G870863 | NA | other | upstream | 1352861 | 25820346 ~ 25825388 (+) |
| LOC110534872 | LOC107603288 | other | upstream | 1486555 | 25688669 ~ 25794691 (+) |
| LOC110533530 | LOC106603640 | other | upstream | 1824974 | 25057727 ~ 25379589 (+) |
| ap2b1 | ap2b1 | other | downstream | 83103 | 27177610 ~ 27268794 (+) |
| G874108 | pgk | other | downstream | 911253 | 28089906 ~ 28117360 (+) |
| LOC110533598 | LOC106603479 | other | downstream | 984174 | 28162794 ~ 28171287 (+) |
| G874438 | LOC106603484 | other | downstream | 1377887 | 28556540 ~ 28557644 (+) |
