Gene
RNA
| Item | Value |
|---|---|
| gene id | G873409 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 27497463 ~ 27499392 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU994347 | True | 1893 | lncRNA | 0.42 | 2 | 27497463 | 27499392 |
27,495,600
27,496,000
27,496,400
27,496,800
27,497,200
27,497,600
27,498,000
27,498,400
27,498,800
27,499,200
27,499,600
27,500,000
27,500,400
27,500,800
27,501,200
27,501,600
27,502,000
27,502,400
27,502,800
27,503,200
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533580 | tex14 | coding | downstream | 130907 | 27330589 ~ 27366556 (-) |
| LOC110533583 | LOC100196673 | coding | downstream | 185641 | 27305871 ~ 27311822 (-) |
| LOC110533581 | gas2l2 | coding | downstream | 191902 | 27289957 ~ 27305561 (-) |
| pex12 | pex12 | coding | downstream | 318776 | 27174930 ~ 27178687 (-) |
| LOC110533573 | NA | coding | downstream | 402761 | 27092272 ~ 27094702 (-) |
| LOC110534878 | trim37 | coding | upstream | 202 | 27499594 ~ 27539649 (-) |
| LOC110533586 | rabgef1 | coding | upstream | 44662 | 27544054 ~ 27563122 (-) |
| kctd7 | LOC106603469 | coding | upstream | 75235 | 27574627 ~ 27578300 (-) |
| LOC118936908 | LOC106567662 | coding | upstream | 90381 | 27589773 ~ 27592690 (-) |
| LOC110533589 | LOC106603469 | coding | upstream | 124660 | 27624052 ~ 27633778 (-) |
| G873346 | NA | non-coding | downstream | 88263 | 27408770 ~ 27409200 (-) |
| G873281 | NA | non-coding | downstream | 121206 | 27318532 ~ 27376257 (-) |
| G873297 | NA | non-coding | downstream | 161007 | 27334844 ~ 27336456 (-) |
| G873273 | NA | non-coding | downstream | 195825 | 27301388 ~ 27301638 (-) |
| G873271 | NA | non-coding | downstream | 197522 | 27299604 ~ 27299941 (-) |
| G873431 | NA | non-coding | upstream | 53226 | 27552618 ~ 27552840 (-) |
| G873432 | NA | non-coding | upstream | 54909 | 27554301 ~ 27555211 (-) |
| G873436 | NA | non-coding | upstream | 66779 | 27566171 ~ 27566517 (-) |
| G873209 | orai2 | other | downstream | 332913 | 27162900 ~ 27164550 (-) |
| LOC110533569 | LOC106567674 | other | downstream | 585837 | 26890009 ~ 26911668 (-) |
| G866654 | NA | other | downstream | 5673842 | 21819111 ~ 21823621 (-) |
| G865988 | LOC106578276 | other | downstream | 5737611 | 21759124 ~ 21759852 (-) |
| G873784 | LOC106573797 | other | upstream | 83537 | 27582929 ~ 27584262 (-) |
| G874706 | NA | other | upstream | 1040837 | 28540229 ~ 28543267 (-) |
| G875194 | NA | other | upstream | 1441848 | 28941240 ~ 28985070 (-) |
| LOC110533621 | NA | other | upstream | 2415975 | 29906094 ~ 29922728 (-) |
| G878962 | NA | other | upstream | 3948090 | 31447482 ~ 31449163 (-) |
