Gene
RNA
| Item | Value |
|---|---|
| gene id | G873783 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 27581553 ~ 27582037 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU994732 | True | 485 | lncRNA | 0.49 | 1 | 27581553 | 27582037 |
27,580,400
27,580,800
27,581,200
27,581,600
27,582,000
27,582,400
27,582,800
27,583,200
27,583,600
27,584,000
27,584,400
27,584,800
27,585,200
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| kctd7 | LOC106603469 | coding | downstream | 3253 | 27574627 ~ 27578300 (-) |
| LOC110533586 | rabgef1 | coding | downstream | 18620 | 27544054 ~ 27563122 (-) |
| LOC110534878 | trim37 | coding | downstream | 41904 | 27499594 ~ 27539649 (-) |
| LOC110533580 | tex14 | coding | downstream | 214997 | 27330589 ~ 27366556 (-) |
| LOC110533583 | LOC100196673 | coding | downstream | 269731 | 27305871 ~ 27311822 (-) |
| LOC118936908 | LOC106567662 | coding | upstream | 7736 | 27589773 ~ 27592690 (-) |
| LOC110533589 | LOC106603469 | coding | upstream | 42015 | 27624052 ~ 27633778 (-) |
| cux1a | LOC106603419 | coding | upstream | 75025 | 27657062 ~ 27870154 (-) |
| LOC110533591 | LOC106603471 | coding | upstream | 307451 | 27889488 ~ 27969015 (-) |
| LOC110534912 | LOC106603420 | coding | upstream | 398696 | 27980733 ~ 27982670 (-) |
| G873778 | NA | non-coding | downstream | 59 | 27581089 ~ 27581494 (-) |
| G873781 | NA | non-coding | downstream | 1927 | 27579102 ~ 27579626 (-) |
| G873775 | NA | non-coding | downstream | 10619 | 27570631 ~ 27570934 (-) |
| G873437 | NA | non-coding | downstream | 14166 | 27567098 ~ 27567387 (-) |
| G873436 | NA | non-coding | downstream | 15036 | 27566171 ~ 27566517 (-) |
| G873812 | NA | non-coding | upstream | 28559 | 27610596 ~ 27610835 (-) |
| G873813 | LOC100380853 | non-coding | upstream | 28978 | 27611015 ~ 27611667 (-) |
| G873815 | NA | non-coding | upstream | 32625 | 27614662 ~ 27614869 (-) |
| G873817 | NA | non-coding | upstream | 34479 | 27616516 ~ 27616716 (-) |
| G873209 | orai2 | other | downstream | 417003 | 27162900 ~ 27164550 (-) |
| LOC110533569 | LOC106567674 | other | downstream | 669927 | 26890009 ~ 26911668 (-) |
| G866654 | NA | other | downstream | 5757932 | 21819111 ~ 21823621 (-) |
| G865988 | LOC106578276 | other | downstream | 5821701 | 21759124 ~ 21759852 (-) |
| G873784 | LOC106573797 | other | upstream | 892 | 27582929 ~ 27584262 (-) |
| G874706 | NA | other | upstream | 958192 | 28540229 ~ 28543267 (-) |
| G875194 | NA | other | upstream | 1359203 | 28941240 ~ 28985070 (-) |
| LOC110533621 | NA | other | upstream | 2333330 | 29906094 ~ 29922728 (-) |
| G878962 | NA | other | upstream | 3865445 | 31447482 ~ 31449163 (-) |
