G873759


Basic Information

Item Value
gene id G873759
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 28055071 ~ 28079885 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU994706
attatgtagatatattgaagcatcatctcaaaacaacagtcaggaagttaaagcttggttgcaaatgggtcttccaaattaacaatgaccccaagcatacttccaaagttgtggcaaaatggcttaaggacaacaaagtcaaggtattggagtggccatcacaaagccctgacctcaatcccatagaaaatttgtgggaaaacctgaaaaagtgtgtgcgagcaaggaggcctacaaacctgactcagttacaccagctctgtcaggaagaatgggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU994706 True 277 lncRNA 0.43 2 28055071 28079885

Neighbor

gene id symbol gene type direction distance location
LOC110533593 LOC106603472 coding upstream 51056 27991680 ~ 28004015 (+)
LOC110533592 LOC106568026 coding upstream 166164 27880392 ~ 27888907 (+)
ppm1e ppm1e coding upstream 558334 27409651 ~ 27496872 (+)
LOC110533582 rad51c coding upstream 658353 27366588 ~ 27396718 (+)
LOC110533584 ska2 coding upstream 724487 27309669 ~ 27330584 (+)
LOC118936920 LOC106571430 coding downstream 63428 28143313 ~ 28144703 (+)
LOC110533598 LOC106603479 coding downstream 82909 28162794 ~ 28171287 (+)
LOC110534879 LOC106603480 coding downstream 223029 28302914 ~ 28321189 (+)
LOC110533601 LOC106603421 coding downstream 299544 28379429 ~ 28388942 (+)
LOC110533603 LOC106603482 coding downstream 314310 28394195 ~ 28412922 (+)
G873754 NA non-coding upstream 5086 28049694 ~ 28049985 (+)
G873752 NA non-coding upstream 6693 28048125 ~ 28048378 (+)
G873745 NA non-coding upstream 17262 28037221 ~ 28037809 (+)
G873699 NA non-coding upstream 20101 28034742 ~ 28034970 (+)
G873742 NA non-coding upstream 23347 28031428 ~ 28031724 (+)
G874096 NA non-coding downstream 4148 28084033 ~ 28084287 (+)
G874127 NA non-coding downstream 54928 28134813 ~ 28135019 (+)
G874133 NA non-coding downstream 61600 28141485 ~ 28141736 (+)
G874135 NA non-coding downstream 63624 28143509 ~ 28143725 (+)
ap2b1 ap2b1 other upstream 786277 27177610 ~ 27268794 (+)
LOC110534876 LOC106603451 other upstream 1195968 26848371 ~ 26860066 (+)
ypel2a LOC106603438 other upstream 1958271 26079908 ~ 26096800 (+)
G870863 NA other upstream 2229683 25820346 ~ 25825388 (+)
G874108 pgk other downstream 10021 28089906 ~ 28117360 (+)
G874438 LOC106603484 other downstream 476655 28556540 ~ 28557644 (+)
G874378 NA other downstream 497567 28577452 ~ 28584415 (+)
G874510 NA other downstream 647889 28727774 ~ 28738905 (+)

Expression


Co-expression Network