G874096


Basic Information

Item Value
gene id G874096
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 28084033 ~ 28084287 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU995054
GAGCAGCGctttgtatcaatatgttttgaccactttttattttatttctatttcacctttatttaaccaggtaggctagttgagaacaagttctcatttacaactgcgacctggccaagacaaagcaaagcagtgcgacacaaacaacaacagagttacacatggaataaacaaacatagtcaataacacaataggaaaaaaagtctatatacagtgtgtgcaaatgaggtaagataagagaggtaaggcaatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU995054 True 255 lncRNA 0.36 1 28084033 28084287

Neighbor

gene id symbol gene type direction distance location
LOC110533593 LOC106603472 coding upstream 80018 27991680 ~ 28004015 (+)
LOC110533592 LOC106568026 coding upstream 195126 27880392 ~ 27888907 (+)
ppm1e ppm1e coding upstream 587296 27409651 ~ 27496872 (+)
LOC110533582 rad51c coding upstream 687315 27366588 ~ 27396718 (+)
LOC110533584 ska2 coding upstream 753449 27309669 ~ 27330584 (+)
LOC118936920 LOC106571430 coding downstream 59026 28143313 ~ 28144703 (+)
LOC110533598 LOC106603479 coding downstream 78507 28162794 ~ 28171287 (+)
LOC110534879 LOC106603480 coding downstream 218627 28302914 ~ 28321189 (+)
LOC110533601 LOC106603421 coding downstream 295142 28379429 ~ 28388942 (+)
LOC110533603 LOC106603482 coding downstream 309908 28394195 ~ 28412922 (+)
G873759 NA non-coding upstream 4148 28055071 ~ 28079885 (+)
G873754 NA non-coding upstream 34048 28049694 ~ 28049985 (+)
G873752 NA non-coding upstream 35655 28048125 ~ 28048378 (+)
G873745 NA non-coding upstream 46224 28037221 ~ 28037809 (+)
G873699 NA non-coding upstream 49063 28034742 ~ 28034970 (+)
G874127 NA non-coding downstream 50526 28134813 ~ 28135019 (+)
G874133 NA non-coding downstream 57198 28141485 ~ 28141736 (+)
G874135 NA non-coding downstream 59222 28143509 ~ 28143725 (+)
G874286 NA non-coding downstream 160975 28245262 ~ 28245462 (+)
ap2b1 ap2b1 other upstream 815239 27177610 ~ 27268794 (+)
LOC110534876 LOC106603451 other upstream 1224930 26848371 ~ 26860066 (+)
ypel2a LOC106603438 other upstream 1987233 26079908 ~ 26096800 (+)
G870863 NA other upstream 2258645 25820346 ~ 25825388 (+)
G874108 pgk other downstream 5619 28089906 ~ 28117360 (+)
G874438 LOC106603484 other downstream 472253 28556540 ~ 28557644 (+)
G874378 NA other downstream 493165 28577452 ~ 28584415 (+)
G874510 NA other downstream 643487 28727774 ~ 28738905 (+)

Expression


Co-expression Network