G874108 (pgk)


Basic Information

Item Value
gene id G874108
gene name pgk
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 28089906 ~ 28117360 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU995068
tcacttttttttattttacaccaACTGTTTTATTCTGTGAGGGTCTGTTCAGGTCACATGATTTGCAGTAGCTCGACCCCTGAAACCACCACTGGGTAACAACCATCTTACAAGCCACAGGATCATAGGATGGATGACATAACAGGGGGGAGAAACATGGTTGAGACAATGGGGGCAACTGACACAGAGACATTTGTGTGAAAACAAATATAAAGGTCTAGATAGAGTTACAGCACATTTTTACGCTTGAAGGGTTGTAAAAACTCCCTGGGCTGGCTGGCTATATAAGAGTAATACAAACAAACACAAGCAAGCACTCTTTTACACAGGCGATATAGATGACAAATTCCCACATTTCTGTATGATGACAACAGTTGTAGCTGCAGTTGACTGGTCTCTGAAAAACACAGCTCGAAGGAACATAAGTGCATATGAGGGAGTGAGGGTGGTTTCTGCTGAGAACACCTCCACTTCCTCAGTGTGGAAACTGCTAATGGCAGATGTTGGGCACGTGTAGCAGCGAGAGAGATATTGCAGTTTGTGTCAGCAGTCTggacagtagtagactagagagCAGGGGTGGTGCTAGACAAGCGCAGGTGGGAAACTTAGGGAGCACTTTGCCTTGGGGGCTGGGTGGGTGTCCAAACTCAGGCGGGTGTGTTTGTCTTCACTCCCACCTCTCCTAGGTGATGGGGATGGGGCTTAGGCGCTGCTGAGGGCATCCACACCGGGCAACACTTTACCCTCCAGAAGCTCCAGACTGGCTCCGCCTCCTGTGCTGACATGGCTGACCTTATCCTCTGTGCCCCATTTGGCGCAGCAGGTAGCTGTGTCACCTCCACCGATGATTGTGACGCAGCCTGAGTTGGTGACCTCCACCACTTTGTCCATCAGGCTCTTGGTTCCTTTGGCAAAGTTCTCAAACTCAAACACACCAACGGGGCCGTTCCACACAATCTGCTTGGCTCTGCCTACAGCCTCTGCGAAGAGCTTGTTGCTCTCGGGTCCACAGTCCAGACCctggggagaacagagggagcgATGGACACAGTTTTACGTACTGATCTACAATATCAACACAAAACTATATCCTATATTTTATTTCACTATGAAagtgatacagtatatcaaatTGCTAGCTAGCACAATAACTAAGGAAAATTCCCATGACCACCCCTCAAGAAGACAATAAAACCCaatcagggttgtgttcattaggtaccaaactgaagaaaacggactgaaacTTGGAGGGACTTCCCTGGACTTGTCCAAAGCTTGTTTTAGTTTTCTGTTACAAAGCGTTTCAAAATGTTTTACATTGCATGCCCttatgaacatgacccaggttgctctcctcctctcctcaccatccaGCCTGCGGGGATGCCAGCAGCCACAGTGGCGTTGCCAGTCTGGGCATGCTCGTCAAACTTCTCGGCGGTGATGAAGTCAACGGGTAGGTTGATCTTGACATTGTTCTTCTCAGCCTTGGCCATCAGCTCTTTGACGATCTTGGCGCCCTCCTCATCATACAGGGAGGTGCCGATCTCCATGTTGTTGAGGACATTGAGGAAGGTGAAGGCCATGCCACCACCGATGATCATCTCATTGACCTGGTCCAACATGTTGTTGATCAGTTGAATCTTGTCCTTGACCTTGGCTCCTCCGAGAATGGCCAGAAAgggcctggctggtttctccaGAGCCATGGCAAAGTAGTCCAGCTCCTTCTTCATCAGGAAACCTGCAGCCTTCTGGGACAGGTTCACTCCAACCATGGagCTGTGGGCTCTGTGTGCTGTGCCAAAGGCATCATTGACGTAGACATCTCCCAGTTTAGACAGAGAGGCTCTGAAGGAATCAATCTGCTCCTGGGTTGCTTTGGTCTTGTTTCCGGAGGTGTCCTTGCCCTTGCCCTCCTCAGCGACGTGGAATCTCAGGTTCTCCAGGAGAATGACGGAACCCTCTGCGGGGTCTGCGCAGGCCTGCTCTACATCGGGACCCACACAGTCCTTCAGGAAGTGCACGTCCTTGCCCAGCAGGCTCTTGAGCTCGGCGGCCACGGGCTCCAGGGAGAATTTGTCAGGCATGGGGTTCCCATCAGGACGACCCAAGTGGCTCATCAGCACCACGGCCTTGGCCCCATGATCCAGACAGTGCTTGATGGTGGGGACAGCAGCCTTGATCCTCTGGTTGTTTGTGATTTTTTGGTCCTTCATGGGCACATTGAAATCAACCCTCATGATCACGCGCTTCCCATTTACGTCCACCTTGTCCAGGGTGAGTTTATTTGACAGCGACATTTTGATGTTTTACTTGCACCTGCTCTGCTGTGTTCCTCGTTCCGATCTTCACCTCACTCTGCTGATGCCGGGTAGTTCCCGAATGAAATGACCTTAGCGCAGGGAGGAACTTCTGATGGACGGGACGTTAGCTTTGGTCAAAAGCTAATACGAGACTGCTGCATCAGCACTGTCATTGTGTTGTT

Function

symbol description
pgk Predicted to enable ADP binding activity; ATP binding activity; and phosphoglycerate kinase activity. Involved in chemical synaptic transmission and muscle cell cellular homeostasis. Located in M band and Z disc. Is expressed in several structures, including adult head; adult heart; and muscle system. Human ortholog(s) of this gene implicated in hemolytic anemia and phosphoglycerate kinase 1 deficiency. Orthologous to several human genes including PGK1 (phosphoglycerate kinase 1).

NR:

description
phosphoglycerate kinase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU995068 True 2494 TUCP 0.50 10 28089906 28117360

Neighbor

gene id symbol gene type direction distance location
LOC110533593 LOC106603472 coding upstream 85891 27991680 ~ 28004015 (+)
LOC110533592 LOC106568026 coding upstream 200999 27880392 ~ 27888907 (+)
ppm1e ppm1e coding upstream 593169 27409651 ~ 27496872 (+)
LOC110533582 rad51c coding upstream 693188 27366588 ~ 27396718 (+)
LOC110533584 ska2 coding upstream 759322 27309669 ~ 27330584 (+)
LOC118936920 LOC106571430 coding downstream 25953 28143313 ~ 28144703 (+)
LOC110533598 LOC106603479 coding downstream 45434 28162794 ~ 28171287 (+)
LOC110534879 LOC106603480 coding downstream 185554 28302914 ~ 28321189 (+)
LOC110533601 LOC106603421 coding downstream 262069 28379429 ~ 28388942 (+)
LOC110533603 LOC106603482 coding downstream 276835 28394195 ~ 28412922 (+)
G874096 NA non-coding upstream 5619 28084033 ~ 28084287 (+)
G873759 NA non-coding upstream 10021 28055071 ~ 28079885 (+)
G873754 NA non-coding upstream 39921 28049694 ~ 28049985 (+)
G873752 NA non-coding upstream 41528 28048125 ~ 28048378 (+)
G873745 NA non-coding upstream 52097 28037221 ~ 28037809 (+)
G874127 NA non-coding downstream 17453 28134813 ~ 28135019 (+)
G874133 NA non-coding downstream 24125 28141485 ~ 28141736 (+)
G874135 NA non-coding downstream 26149 28143509 ~ 28143725 (+)
G874286 NA non-coding downstream 127902 28245262 ~ 28245462 (+)
ap2b1 ap2b1 other upstream 821112 27177610 ~ 27268794 (+)
LOC110534876 LOC106603451 other upstream 1230803 26848371 ~ 26860066 (+)
ypel2a LOC106603438 other upstream 1993106 26079908 ~ 26096800 (+)
G870863 NA other upstream 2264518 25820346 ~ 25825388 (+)
G874438 LOC106603484 other downstream 439180 28556540 ~ 28557644 (+)
G874378 NA other downstream 460092 28577452 ~ 28584415 (+)
G874510 NA other downstream 610414 28727774 ~ 28738905 (+)
G874876 NA other downstream 712412 28829772 ~ 28830164 (+)

Expression


Co-expression Network