G874133


Basic Information

Item Value
gene id G874133
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 28141485 ~ 28141736 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU995094
gtttcatgagttgaaataaaagatcccagaaatgttccatacacaatAAGctaatttctctaaaatgttgtgcacaaatttgtttacatctctgttagtgagcatttctccattgacaagataatccatccacctgacaggtgtggcatatcaagaagctgattaaacagcatgatcattatagattcaccttgtgctggggacaataaaaggccactctggcatgtgcagttttttcacgcaacacaatgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU995094 True 252 lncRNA 0.38 1 28141485 28141736

Neighbor

gene id symbol gene type direction distance location
LOC110533593 LOC106603472 coding upstream 137470 27991680 ~ 28004015 (+)
LOC110533592 LOC106568026 coding upstream 252578 27880392 ~ 27888907 (+)
ppm1e ppm1e coding upstream 644748 27409651 ~ 27496872 (+)
LOC110533582 rad51c coding upstream 744767 27366588 ~ 27396718 (+)
LOC110533584 ska2 coding upstream 810901 27309669 ~ 27330584 (+)
LOC118936920 LOC106571430 coding downstream 1577 28143313 ~ 28144703 (+)
LOC110533598 LOC106603479 coding downstream 21058 28162794 ~ 28171287 (+)
LOC110534879 LOC106603480 coding downstream 161178 28302914 ~ 28321189 (+)
LOC110533601 LOC106603421 coding downstream 237693 28379429 ~ 28388942 (+)
LOC110533603 LOC106603482 coding downstream 252459 28394195 ~ 28412922 (+)
G874127 NA non-coding upstream 6466 28134813 ~ 28135019 (+)
G874096 NA non-coding upstream 57198 28084033 ~ 28084287 (+)
G873759 NA non-coding upstream 61600 28055071 ~ 28079885 (+)
G873754 NA non-coding upstream 91500 28049694 ~ 28049985 (+)
G873752 NA non-coding upstream 93107 28048125 ~ 28048378 (+)
G874135 NA non-coding downstream 1773 28143509 ~ 28143725 (+)
G874286 NA non-coding downstream 103526 28245262 ~ 28245462 (+)
G874406 NA non-coding downstream 300161 28441897 ~ 28442894 (+)
G874108 pgk other upstream 24125 28089906 ~ 28117360 (+)
ap2b1 ap2b1 other upstream 872691 27177610 ~ 27268794 (+)
LOC110534876 LOC106603451 other upstream 1282382 26848371 ~ 26860066 (+)
ypel2a LOC106603438 other upstream 2044685 26079908 ~ 26096800 (+)
G874438 LOC106603484 other downstream 414804 28556540 ~ 28557644 (+)
G874378 NA other downstream 435716 28577452 ~ 28584415 (+)
G874510 NA other downstream 586038 28727774 ~ 28738905 (+)
G874876 NA other downstream 688036 28829772 ~ 28830164 (+)

Expression


Co-expression Network