Gene
RNA
| Item | Value |
|---|---|
| gene id | G874406 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 28441897 ~ 28442894 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU995415 | True | 710 | lncRNA | 0.36 | 2 | 28441897 | 28442894 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533603 | LOC106603482 | coding | upstream | 28975 | 28394195 ~ 28412922 (+) |
| LOC110533601 | LOC106603421 | coding | upstream | 52955 | 28379429 ~ 28388942 (+) |
| LOC110534879 | LOC106603480 | coding | upstream | 120708 | 28302914 ~ 28321189 (+) |
| LOC110533598 | LOC106603479 | coding | upstream | 270610 | 28162794 ~ 28171287 (+) |
| LOC118936920 | LOC106571430 | coding | upstream | 297194 | 28143313 ~ 28144703 (+) |
| LOC110533607 | LOC106603487 | coding | downstream | 192900 | 28635794 ~ 28641714 (+) |
| LOC110533610 | wwc1 | coding | downstream | 205668 | 28648562 ~ 28693892 (+) |
| rars1 | syrc | coding | downstream | 256479 | 28699373 ~ 28729367 (+) |
| LOC118936921 | NA | coding | downstream | 788657 | 29231527 ~ 29240203 (+) |
| gemin5 | LOC106603490 | coding | downstream | 1063379 | 29506273 ~ 29525563 (+) |
| G874286 | NA | non-coding | upstream | 196435 | 28245262 ~ 28245462 (+) |
| G874135 | NA | non-coding | upstream | 298172 | 28143509 ~ 28143725 (+) |
| G874133 | NA | non-coding | upstream | 300161 | 28141485 ~ 28141736 (+) |
| G874431 | NA | non-coding | downstream | 80497 | 28523391 ~ 28524965 (+) |
| G874379 | LOC106603484 | non-coding | downstream | 104703 | 28547597 ~ 28551650 (+) |
| G874441 | NA | non-coding | downstream | 116396 | 28559290 ~ 28559759 (+) |
| G874453 | NA | non-coding | downstream | 133874 | 28576768 ~ 28577077 (+) |
| G874465 | NA | non-coding | downstream | 181721 | 28624615 ~ 28625319 (+) |
| G874108 | pgk | other | upstream | 324537 | 28089906 ~ 28117360 (+) |
| ppm1e | ppm1e | other | upstream | 945025 | 27409651 ~ 27496872 (+) |
| ap2b1 | ap2b1 | other | upstream | 1173103 | 27177610 ~ 27268794 (+) |
| LOC110534876 | LOC106603451 | other | upstream | 1582794 | 26848371 ~ 26860066 (+) |
| G874438 | LOC106603484 | other | downstream | 113646 | 28556540 ~ 28557644 (+) |
| G874378 | NA | other | downstream | 134558 | 28577452 ~ 28584415 (+) |
| G874510 | NA | other | downstream | 284880 | 28727774 ~ 28738905 (+) |
| G874876 | NA | other | downstream | 386878 | 28829772 ~ 28830164 (+) |
| G875756 | LOC106603491 | other | downstream | 1103745 | 29546639 ~ 29547275 (+) |
