G874706


Basic Information

Item Value
gene id G874706
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 28540229 ~ 28543267 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU995737
AGGTTTTTAAGTCTTTTATTAACATACATCAGCACTTAGCATGTCACAAAAGATCTTGTGCTTATTTAAAAAACAGAGCGTGTGAGAAGCGGATGGAAAAGAGGGAAgataaataaaatatgttttaaatgaaaagagagagataagacAAGGAACAGCTAAGCCTTGCTTTGGGGCaaagagtggtagtagtagtagagtagtagtagtctcCTAGTAGTGTGATCGGGAGAGAATAATAATTACTACCCAGGAGGTTATCAGGGTGAAGAAGTATATATTGAAATCATGTAGAAAGGGTGTCAGTTACTGCTAAAGATGCGGGTTGGTCGGCTCTTACTAAGCATGATTTGATTCTCATATACAGAAAAAGGCTGGTAGGGATATGGAATCACATTTCATATTTCGCTTCAAAGAAACTTTATTTAAACATCTCATTCAATCCCACAACAAGCCTAAATTCAAAGTGCCATAATCATAAGGGCCACAATGACAAAGTGTTAGACGTTCATTAGTTGTAGTTGTGTATTTCTAAAAAACAAACGCTATTTACAGGACAAAATACTAGATTGGTTTATTTTCTTATTGCTTGTTGGTTCCCACTCAGAATTCTGTGGTAAGAGCACATAGCTATAACAACATATACCTGCTATAGAACTGTTCTATATCTATGGGTAAGACTGCCTGGATTGATATAGAATCAGATCTAAGGAGTGGCATCTCAGGAATGAAACTATAACCGTGAACAGTAATAATAAGAAACCTCCTGTAGATGAAATAAAGGAAGACTGGTCTATAAGCCATGTGGAGAGGGTTACATAAAGAAGCTAGAACCTGTTTCTAAACATTACAGCAATAATACCGTTTAAAACCAGGCTTGATGATCAAAAGCATTTAGAAGGGCTCCTGGCAAAACTAATCCACCGGAATGGTTCTCATTTAGACTGTTAACAGTGAAATCAGAACCGAGATAACTGGGTGAGAGAATGAGATCTGTGCAAAAATAACACAGAGGTAGTCCAACAGTAGAATTACAATAGTACACAAAACGGTGCTGAGGCCATCTAGGGACGTGCATGTGAACGACATCATTTTAAAAGAAGGACGAGGAAAATAAATACACATGGAAAGCAAAAGGGTGCATTTGTGTCATCTACTGCAAAGAAGGTGTAGTGTTACAAAGCAGAGACTACTGTAGCAGCTCTAGAACCACCTTAGCACAAGACACTGTTCCGTTCATAGTGCCACAATGTGTGACGAACGTCTTCATTCCCATCTGAGTGCTCTAGATACAGTCATTGCCTAGTTAACACTGAAGACAAAACAAGAGACTACCGCTATTGCCATGATTCAAAGATCCTGAATGTCAATTTATAGAACACTTCTAATAGGTAGAAAAATCATACTTATTTTCCCCATGTCAGATTTTCTGCTGGGAGAGATGCCAACCAACACAACGATAACAAACTACAATAGATATTCCGTTTCAAAGTGACTTGGTACAGCACAAAACAAGTATTTCGTTATACCTCCCTTGTGTGTATCAGGGTCTTACTATGGGGTAGTACAACGGTACTGCTATCCCAGCCTGTAGTCTGATGTCCGCCACGCCTTCATCTGCCCCCTCCCCATTGCCCCATGGACAAACTGAAACATCAAAGACTACAGGATTACACTAGGCACCACTCCTCTCTgatcccactctccctccttcccaccaGGCACCACTCCTCTCTgatcccactctccctccttcccaccaGGCACCACTCCTCTCTgatcccactctccctccttcccaccaGGCACCACTCCTCTCTgatcccactctccctccttcccaccaGGCACCACTCCTCTCTgatcccactctccctccttcccaccaGGCACCACTCCTCTCTgatcccactctccctccttgcCACCAGGCACCACTCCTCTCTgatcccactctccctccttgcCACCAGGCACCACTCCTCTCTgatcccactctccctccttcccaccaGGCACCACTCCCACTTTTATCCCCAACTACTGTAGCTACCCAGAACAAGGGAGAATGGAGGGGGAGGGTTGCTATACATTCCAATAGGCTACCTGTCTGGTACAGGGTGTTTAGTCTGCTGTAGAAGACACATACATTCTGAAGAAAGTATTCCCCCACTCCCCACTATTTACTCCGCATAGCAAAAGAAAGGAGAAatcaaagaaagaaaaaaaaacacaaaaccaaGAGCTCATTATTAAACCATTAGCATCTTTAACAATAACTCAAAAACCTTTTCTGTGGCTAACATcagtttttttccccttctagaacattttacaattttttttatgcAAGACTTGTTGTTATTATTACTTTAAAAAAAGTCTGTTTCGTTGTTGATGATGCGTTGTTTCTGCTTCCCACCGCCTGACCGGACTACTTCGCCATGGTCTAGTCGCTGTCTTCCATTACAGGGTCTGTGTCCCAGCATGTGATGTCGATCTCTGTACACACGCACAGGGCATAGATAAACATCCACAAATACAGTTGGTCAATGtttgaaaaaacaaaaacaaacacacacacaaactttaaTCTTTTTATCCAGGGTGTCTTACAATATGTCAAATAAATGGGCAGAAACAACCACATACTATAACAATCAGCATCATAAGTCATAAGACTGTCTTCAAAAATAAGTGTGACAGCAGTTCTTGAATAAAATAGTAACAACAACATGATTAGCC

Function

NR:

description
PREDICTED: protein TANC2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU995737 True 2745 TUCP 0.42 2 28540229 28543267

Neighbor

gene id symbol gene type direction distance location
LOC110533602 NA coding downstream 147119 28388354 ~ 28399671 (-)
LOC110533600 LOC106603481 coding downstream 160867 28361976 ~ 28379362 (-)
LOC110533599 LOC106603477 coding downstream 323100 28171634 ~ 28217129 (-)
LOC110533597 LOC106603476 coding downstream 387942 28149090 ~ 28152287 (-)
LOC110533596 LOC106603475 coding downstream 409964 28128521 ~ 28130265 (-)
LOC110533605 LOC106603484 coding upstream 6196 28549463 ~ 28560015 (-)
LOC110533606 LOC106603485 coding upstream 36166 28579433 ~ 28624349 (-)
arl10 LOC106603486 coding upstream 100302 28643569 ~ 28648218 (-)
LOC110533612 LOC106603488 coding upstream 188536 28731803 ~ 28815504 (-)
LOC110533613 LOC106603489 coding upstream 365124 28908391 ~ 29166800 (-)
G874635 NA non-coding downstream 140874 28396719 ~ 28399355 (-)
G874626 NA non-coding downstream 154130 28364585 ~ 28386099 (-)
G874592 NA non-coding downstream 234208 28303011 ~ 28306021 (-)
G874278 NA non-coding downstream 304526 28235407 ~ 28235703 (-)
G874707 NA non-coding upstream 428 28543695 ~ 28546427 (-)
G874741 NA non-coding upstream 30720 28573987 ~ 28574203 (-)
G874765 NA non-coding upstream 86746 28630013 ~ 28630301 (-)
G874748 NA non-coding upstream 99031 28642298 ~ 28643496 (-)
G874749 NA non-coding upstream 100807 28644074 ~ 28644930 (-)
G873784 LOC106573797 other downstream 955967 27582929 ~ 27584262 (-)
LOC110533580 tex14 other downstream 1186983 27330589 ~ 27366556 (-)
G873209 orai2 other downstream 1375679 27162900 ~ 27164550 (-)
LOC110533569 LOC106567674 other downstream 1628603 26890009 ~ 26911668 (-)
G866654 NA other downstream 6716608 21819111 ~ 21823621 (-)
G875194 NA other upstream 397973 28941240 ~ 28985070 (-)
LOC110533621 NA other upstream 1372100 29906094 ~ 29922728 (-)
G878962 NA other upstream 2904215 31447482 ~ 31449163 (-)
G879440 LOC106603524 other upstream 3682165 32225432 ~ 32225936 (-)
LOC110533652 LOC106603525 other upstream 3703744 32246991 ~ 32353202 (-)

Expression

G874706 Expression in all Baseline Samples

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G874706 Expression in each Bioproject

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G874706 Expression in each Sample
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Co-expression Network