Gene
RNA
| Item | Value |
|---|---|
| gene id | G874438 |
| gene name | LOC106603484 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 28556540 ~ 28557644 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| proline-rich protein 7-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU995448 | True | 1105 | TUCP | 0.55 | 1 | 28556540 | 28557644 |
28,553,600
28,554,000
28,554,400
28,554,800
28,555,200
28,555,600
28,556,000
28,556,400
28,556,800
28,557,200
28,557,600
28,558,000
28,558,400
28,558,800
28,559,200
28,559,600
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533604 | LOC106603483 | coding | upstream | 13273 | 28419323 ~ 28543267 (+) |
| LOC110533603 | LOC106603482 | coding | upstream | 143618 | 28394195 ~ 28412922 (+) |
| LOC110533601 | LOC106603421 | coding | upstream | 167598 | 28379429 ~ 28388942 (+) |
| LOC110534879 | LOC106603480 | coding | upstream | 235351 | 28302914 ~ 28321189 (+) |
| LOC110533598 | LOC106603479 | coding | upstream | 385253 | 28162794 ~ 28171287 (+) |
| LOC110533607 | LOC106603487 | coding | downstream | 78150 | 28635794 ~ 28641714 (+) |
| LOC110533610 | wwc1 | coding | downstream | 90918 | 28648562 ~ 28693892 (+) |
| rars1 | syrc | coding | downstream | 141729 | 28699373 ~ 28729367 (+) |
| LOC118936921 | NA | coding | downstream | 673907 | 29231527 ~ 29240203 (+) |
| gemin5 | LOC106603490 | coding | downstream | 948629 | 29506273 ~ 29525563 (+) |
| G874379 | LOC106603484 | non-coding | upstream | 4890 | 28547597 ~ 28551650 (+) |
| G874431 | NA | non-coding | upstream | 31575 | 28523391 ~ 28524965 (+) |
| G874406 | NA | non-coding | upstream | 113646 | 28441897 ~ 28442894 (+) |
| G874286 | NA | non-coding | upstream | 311078 | 28245262 ~ 28245462 (+) |
| G874441 | NA | non-coding | downstream | 1646 | 28559290 ~ 28559759 (+) |
| G874453 | NA | non-coding | downstream | 19124 | 28576768 ~ 28577077 (+) |
| G874465 | NA | non-coding | downstream | 66971 | 28624615 ~ 28625319 (+) |
| G874466 | NA | non-coding | downstream | 67811 | 28625455 ~ 28625656 (+) |
| G874469 | NA | non-coding | downstream | 71610 | 28629254 ~ 28629510 (+) |
| G874108 | pgk | other | upstream | 439180 | 28089906 ~ 28117360 (+) |
| ppm1e | ppm1e | other | upstream | 1059668 | 27409651 ~ 27496872 (+) |
| ap2b1 | ap2b1 | other | upstream | 1287746 | 27177610 ~ 27268794 (+) |
| LOC110534876 | LOC106603451 | other | upstream | 1697437 | 26848371 ~ 26860066 (+) |
| G874378 | NA | other | downstream | 19808 | 28577452 ~ 28584415 (+) |
| G874510 | NA | other | downstream | 170130 | 28727774 ~ 28738905 (+) |
| G874876 | NA | other | downstream | 272128 | 28829772 ~ 28830164 (+) |
| G875756 | LOC106603491 | other | downstream | 988995 | 29546639 ~ 29547275 (+) |
| G875776 | NA | other | downstream | 1023482 | 29581126 ~ 29582530 (+) |
