G874510


Basic Information

Item Value
gene id G874510
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 28727774 ~ 28738905 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU995526
ATGTAGATCTCTCTGCTCACAAGGAACACATTTACCTCAAGGACCCATAAAGTCCGTCATGATGGATTTTCTGCCATTTGGAATTTTGTGAAAAAGGCTTAAAACGTTGCTACTCTAGCACAAATGACCGATCTGCAGAAAACTTGATATCTGGCATCTAAGGACCAAGGTGTCTCAAAGTACTTTTTTCCAGGCTAGTATGTCAAACAACATGGCCTCTACTGACCAATAAACATTCAAATGGGCGTGGTCTCACACATAAATGCCTATAAATCAGTCATGGATATTTGTAGTGTAATTAAACTTGGTACATGTGGCAAACACTGTCAAGATTCAGCATAACTGGGGCCTcgcgagtggcgcagcagtctaagggaCTGCATCGCAGTGAAACCCAtgaggcacaattggcccagtgtcgtccgggtcagtggagggtttggcctgccgggatgtccttgtcccacaaattggtgcggctggcttccgggttaagcgagcagtgtgttaagaagcagtgcggcatggcagggttgtgttttggaggatgcatggctctcgaccttcacctctcccgagtccgtacgggagttgcagcgatgggtcAACACTCTAAacaccaattggatatcacgaaaaagaggtaaaaaaaaaacaacaaacaagcaCTTTTTATATTGACCACACGGTGGCACTATAACGGGCACATTTTGATATCTCTTGATCTGTTTGACACAGTGATGAAATTCAGAACACATGCTCAAGGTTATGAGTCTAGCTAACCTGTAAAGTATGGTTCAGTTTGGCCACATTGTGGTGCTGTTGTACAGGGAAAAACCATTCATGCAAAAGCTCATTGTCTCATAGCGGCCATATTATTTCAGTTGGCATCTTGGAAAATAGTGCATTTTTTAAGATGTGCATCCATAGATGTTATATTCCAAATATGTTGTCTATCAGTCCAGCGGTTCTGGAGAAGAAGACGTTAAATTAAAGAAGTCAACATCATTGAAACGGGTCCAAAATGCATCAAAAGCTTGATTTTTGAGTTCTGATTTGGTAAGTGTGGTAAACAGTAAAGAAGTAGGTCATCCCAGGGCAATTTGGACTCCGTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU995526 True 1116 TUCP 0.44 2 28727774 28738905

Neighbor

gene id symbol gene type direction distance location
LOC110533610 wwc1 coding upstream 33882 28648562 ~ 28693892 (+)
LOC110533607 LOC106603487 coding upstream 86060 28635794 ~ 28641714 (+)
LOC110533604 LOC106603483 coding upstream 184507 28419323 ~ 28543267 (+)
LOC110533603 LOC106603482 coding upstream 314852 28394195 ~ 28412922 (+)
LOC110533601 LOC106603421 coding upstream 338832 28379429 ~ 28388942 (+)
LOC118936921 NA coding downstream 492646 29231527 ~ 29240203 (+)
gemin5 LOC106603490 coding downstream 767368 29506273 ~ 29525563 (+)
LOC118966731 NA coding downstream 847547 29586452 ~ 29629500 (+)
LOC110533617 LOC106603494 coding downstream 944370 29683275 ~ 29785295 (+)
LOC110533618 LOC106603495 coding downstream 1065367 29804272 ~ 29836898 (+)
G874508 NA non-coding upstream 1649 28725667 ~ 28726125 (+)
G874485 NA non-coding upstream 79669 28647658 ~ 28648105 (+)
G874472 NA non-coding upstream 82775 28643622 ~ 28644999 (+)
G874476 NA non-coding upstream 94332 28633148 ~ 28633442 (+)
G874475 NA non-coding upstream 94847 28632580 ~ 28632927 (+)
G874858 NA non-coding downstream 79768 28818673 ~ 28819552 (+)
G874928 NA non-coding downstream 152428 28891333 ~ 28891720 (+)
G874931 NA non-coding downstream 154549 28893454 ~ 28893795 (+)
G874985 NA non-coding downstream 239454 28978359 ~ 28979023 (+)
G875115 NA non-coding downstream 429047 29167952 ~ 29168218 (+)
G874378 NA other upstream 143359 28577452 ~ 28584415 (+)
G874438 LOC106603484 other upstream 170130 28556540 ~ 28557644 (+)
LOC110533598 LOC106603479 other upstream 557521 28162794 ~ 28171287 (+)
G874108 pgk other upstream 610414 28089906 ~ 28117360 (+)
ppm1e ppm1e other upstream 1230902 27409651 ~ 27496872 (+)
G874876 NA other downstream 90867 28829772 ~ 28830164 (+)
G875756 LOC106603491 other downstream 807734 29546639 ~ 29547275 (+)
G875776 NA other downstream 842221 29581126 ~ 29582530 (+)
LOC110533619 LOC106603497 other downstream 1180371 29919276 ~ 29986082 (+)
G876079 ubb other downstream 1281736 30020641 ~ 30050053 (+)

Expression


Co-expression Network