Gene
RNA
| Item | Value |
|---|---|
| gene id | G874875 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 28828673 ~ 28828931 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU995928 | True | 259 | lncRNA | 0.54 | 1 | 28828673 | 28828931 |
28,826,000
28,826,400
28,826,800
28,827,200
28,827,600
28,828,000
28,828,400
28,828,800
28,829,200
28,829,600
28,830,000
28,830,400
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533612 | LOC106603488 | coding | downstream | 13169 | 28731803 ~ 28815504 (-) |
| arl10 | LOC106603486 | coding | downstream | 180455 | 28643569 ~ 28648218 (-) |
| LOC110533606 | LOC106603485 | coding | downstream | 204324 | 28579433 ~ 28624349 (-) |
| LOC110533605 | LOC106603484 | coding | downstream | 268658 | 28549463 ~ 28560015 (-) |
| LOC110533602 | NA | coding | downstream | 435563 | 28388354 ~ 28399671 (-) |
| LOC110533613 | LOC106603489 | coding | upstream | 79460 | 28908391 ~ 29166800 (-) |
| cnot8 | LOC106603492 | coding | upstream | 697034 | 29525965 ~ 29530539 (-) |
| LOC110533616 | LOC106603491 | coding | upstream | 702999 | 29531930 ~ 29555369 (-) |
| LOC118966732 | NA | coding | upstream | 1009127 | 29838058 ~ 29838736 (-) |
| tbx16l | LOC106603496 | coding | upstream | 1053734 | 29882665 ~ 29899849 (-) |
| G874863 | NA | non-coding | downstream | 5784 | 28822651 ~ 28822889 (-) |
| G874775 | NA | non-coding | downstream | 180927 | 28647509 ~ 28647746 (-) |
| G874774 | NA | non-coding | downstream | 181359 | 28647084 ~ 28647314 (-) |
| G874749 | NA | non-coding | downstream | 183743 | 28644074 ~ 28644930 (-) |
| G874748 | NA | non-coding | downstream | 185177 | 28642298 ~ 28643496 (-) |
| G875167 | NA | non-coding | upstream | 64513 | 28893444 ~ 28893677 (-) |
| G875168 | NA | non-coding | upstream | 67360 | 28896291 ~ 28896686 (-) |
| G875132 | NA | non-coding | upstream | 73196 | 28902127 ~ 28935126 (-) |
| G875202 | NA | non-coding | upstream | 122940 | 28951871 ~ 28989388 (-) |
| G875352 | NA | non-coding | upstream | 344987 | 29173918 ~ 29174151 (-) |
| G874706 | NA | other | downstream | 285406 | 28540229 ~ 28543267 (-) |
| G873784 | LOC106573797 | other | downstream | 1244411 | 27582929 ~ 27584262 (-) |
| LOC110533580 | tex14 | other | downstream | 1475427 | 27330589 ~ 27366556 (-) |
| G873209 | orai2 | other | downstream | 1664123 | 27162900 ~ 27164550 (-) |
| LOC110533569 | LOC106567674 | other | downstream | 1917047 | 26890009 ~ 26911668 (-) |
| G875194 | NA | other | upstream | 112309 | 28941240 ~ 28985070 (-) |
| LOC110533621 | NA | other | upstream | 1086436 | 29906094 ~ 29922728 (-) |
| G878962 | NA | other | upstream | 2618551 | 31447482 ~ 31449163 (-) |
| G879440 | LOC106603524 | other | upstream | 3396501 | 32225432 ~ 32225936 (-) |
| LOC110533652 | LOC106603525 | other | upstream | 3418080 | 32246991 ~ 32353202 (-) |
