G874985


Basic Information

Item Value
gene id G874985
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 28978359 ~ 28979023 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU996041
cctccttattggtgtcctttaatggtttatttgcagcaatttgaccataaaggactgattcacgcagtttcctctgaacagttaatgtgtctgttatttgaactctgtgaagcatttatttgggctgcaatttctgaggctggaaaactctaatgaacttatcctccagagcagaggtaactctgggtcttcctttcttgtggaatttcatagtttgtcttcattattat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU996041 True 230 lncRNA 0.38 2 28978359 28979023

Neighbor

gene id symbol gene type direction distance location
rars1 syrc coding upstream 248992 28699373 ~ 28729367 (+)
LOC110533610 wwc1 coding upstream 284467 28648562 ~ 28693892 (+)
LOC110533607 LOC106603487 coding upstream 336645 28635794 ~ 28641714 (+)
LOC110533604 LOC106603483 coding upstream 435092 28419323 ~ 28543267 (+)
LOC110533603 LOC106603482 coding upstream 565437 28394195 ~ 28412922 (+)
LOC118936921 NA coding downstream 252528 29231527 ~ 29240203 (+)
gemin5 LOC106603490 coding downstream 527250 29506273 ~ 29525563 (+)
LOC118966731 NA coding downstream 607429 29586452 ~ 29629500 (+)
LOC110533617 LOC106603494 coding downstream 704252 29683275 ~ 29785295 (+)
LOC110533618 LOC106603495 coding downstream 825249 29804272 ~ 29836898 (+)
G874931 NA non-coding upstream 84564 28893454 ~ 28893795 (+)
G874928 NA non-coding upstream 86639 28891333 ~ 28891720 (+)
G874858 NA non-coding upstream 158807 28818673 ~ 28819552 (+)
G874508 NA non-coding upstream 252234 28725667 ~ 28726125 (+)
G874485 NA non-coding upstream 330254 28647658 ~ 28648105 (+)
G875115 NA non-coding downstream 188929 29167952 ~ 29168218 (+)
G875118 NA non-coding downstream 194896 29173919 ~ 29174119 (+)
G875119 NA non-coding downstream 196937 29175960 ~ 29176272 (+)
G875123 NA non-coding downstream 201710 29180733 ~ 29180936 (+)
G875371 NA non-coding downstream 217173 29196196 ~ 29272771 (+)
G874876 NA other upstream 148195 28829772 ~ 28830164 (+)
G874510 NA other upstream 239454 28727774 ~ 28738905 (+)
G874378 NA other upstream 393944 28577452 ~ 28584415 (+)
G874438 LOC106603484 other upstream 420715 28556540 ~ 28557644 (+)
LOC110533598 LOC106603479 other upstream 808106 28162794 ~ 28171287 (+)
G875756 LOC106603491 other downstream 567616 29546639 ~ 29547275 (+)
G875776 NA other downstream 602103 29581126 ~ 29582530 (+)
LOC110533619 LOC106603497 other downstream 940253 29919276 ~ 29986082 (+)
G876079 ubb other downstream 1041618 30020641 ~ 30050053 (+)
LOC110533629 LOC106603502 other downstream 1042068 30021091 ~ 30022290 (+)

Expression


Co-expression Network