G875119


Basic Information

Item Value
gene id G875119
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 29175960 ~ 29176272 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU996175
CGGCTCTCCAGGTCTCCTTCGAATGCTGCACCCACTCttccaccgcaggagcttcggtctggctctgatgccatggggccaggaccggcATGTAGCCCAACACGCACTGGAAAGGTGACATGTTAGTGGATGAGTGGCGGAGTGAATTCTGAGCCACCTCCGCCCATGGGACGTACCTCGCCCATTCAAcgggccggtcctggcaatacgaccgcagaaacctacccacatcctggttcactctctccacctgcccattactctcggggtgaaaacccgaggtcaggctgatcgagacccccagacgctaCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU996175 True 313 lncRNA 0.60 1 29175960 29176272

Neighbor

gene id symbol gene type direction distance location
rars1 syrc coding upstream 446593 28699373 ~ 28729367 (+)
LOC110533610 wwc1 coding upstream 482068 28648562 ~ 28693892 (+)
LOC110533607 LOC106603487 coding upstream 534246 28635794 ~ 28641714 (+)
LOC110533604 LOC106603483 coding upstream 632693 28419323 ~ 28543267 (+)
LOC110533603 LOC106603482 coding upstream 763038 28394195 ~ 28412922 (+)
LOC118936921 NA coding downstream 55279 29231527 ~ 29240203 (+)
gemin5 LOC106603490 coding downstream 330001 29506273 ~ 29525563 (+)
LOC118966731 NA coding downstream 410180 29586452 ~ 29629500 (+)
LOC110533617 LOC106603494 coding downstream 507003 29683275 ~ 29785295 (+)
LOC110533618 LOC106603495 coding downstream 628000 29804272 ~ 29836898 (+)
G875118 NA non-coding upstream 1841 29173919 ~ 29174119 (+)
G875115 NA non-coding upstream 7742 29167952 ~ 29168218 (+)
G874985 NA non-coding upstream 196937 28978359 ~ 28979023 (+)
G874931 NA non-coding upstream 282165 28893454 ~ 28893795 (+)
G874928 NA non-coding upstream 284240 28891333 ~ 28891720 (+)
G875123 NA non-coding downstream 4461 29180733 ~ 29180936 (+)
G875371 NA non-coding downstream 19924 29196196 ~ 29272771 (+)
G875615 NA non-coding downstream 218322 29394594 ~ 29394829 (+)
G875619 NA non-coding downstream 222049 29398321 ~ 29398575 (+)
G874876 NA other upstream 345796 28829772 ~ 28830164 (+)
G874510 NA other upstream 437055 28727774 ~ 28738905 (+)
G874378 NA other upstream 591545 28577452 ~ 28584415 (+)
G874438 LOC106603484 other upstream 618316 28556540 ~ 28557644 (+)
LOC110533598 LOC106603479 other upstream 1005707 28162794 ~ 28171287 (+)
G875756 LOC106603491 other downstream 370367 29546639 ~ 29547275 (+)
G875776 NA other downstream 404854 29581126 ~ 29582530 (+)
LOC110533619 LOC106603497 other downstream 743004 29919276 ~ 29986082 (+)
G876079 ubb other downstream 844369 30020641 ~ 30050053 (+)
LOC110533629 LOC106603502 other downstream 844819 30021091 ~ 30022290 (+)

Expression


Co-expression Network