G875615


Basic Information

Item Value
gene id G875615
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 29394594 ~ 29394829 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU996689
atcggcatatctatttattattgccatcgaaatgttagctgttaaaattagatccaacaataatattaagggattagaaatccgtggcttaaaaactaaggtgtcattgtacgctgatgattcatgttttcttttaaaaccacaattagaatctCTCCATGGCCTTATAGAGGATCTAGATAGTTTTGCTATCATCTGGATAAAAACCAAATTATGATGAATGTACTACATTACGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU996689 True 236 lncRNA 0.32 1 29394594 29394829

Neighbor

gene id symbol gene type direction distance location
LOC118936921 NA coding upstream 154401 29231527 ~ 29240203 (+)
rars1 syrc coding upstream 665227 28699373 ~ 28729367 (+)
LOC110533610 wwc1 coding upstream 700702 28648562 ~ 28693892 (+)
LOC110533607 LOC106603487 coding upstream 752880 28635794 ~ 28641714 (+)
LOC110533604 LOC106603483 coding upstream 851327 28419323 ~ 28543267 (+)
gemin5 LOC106603490 coding downstream 111444 29506273 ~ 29525563 (+)
LOC118966731 NA coding downstream 191623 29586452 ~ 29629500 (+)
LOC110533617 LOC106603494 coding downstream 288446 29683275 ~ 29785295 (+)
LOC110533618 LOC106603495 coding downstream 409443 29804272 ~ 29836898 (+)
LOC100653448 flt2 coding downstream 449192 29844021 ~ 29881548 (+)
G875371 NA non-coding upstream 121823 29196196 ~ 29272771 (+)
G875123 NA non-coding upstream 213658 29180733 ~ 29180936 (+)
G875119 NA non-coding upstream 218322 29175960 ~ 29176272 (+)
G875118 NA non-coding upstream 220475 29173919 ~ 29174119 (+)
G875619 NA non-coding downstream 3492 29398321 ~ 29398575 (+)
G875624 NA non-coding downstream 5279 29400108 ~ 29400311 (+)
G875625 NA non-coding downstream 7152 29401981 ~ 29402293 (+)
G875702 NA non-coding downstream 65583 29460412 ~ 29460709 (+)
G875703 NA non-coding downstream 66160 29460989 ~ 29461318 (+)
G874876 NA other upstream 564430 28829772 ~ 28830164 (+)
G874510 NA other upstream 655689 28727774 ~ 28738905 (+)
G874378 NA other upstream 810179 28577452 ~ 28584415 (+)
G874438 LOC106603484 other upstream 836950 28556540 ~ 28557644 (+)
LOC110533598 LOC106603479 other upstream 1224341 28162794 ~ 28171287 (+)
G875756 LOC106603491 other downstream 151810 29546639 ~ 29547275 (+)
G875776 NA other downstream 186297 29581126 ~ 29582530 (+)
LOC110533619 LOC106603497 other downstream 524447 29919276 ~ 29986082 (+)
G876079 ubb other downstream 625812 30020641 ~ 30050053 (+)
LOC110533629 LOC106603502 other downstream 626262 30021091 ~ 30022290 (+)

Expression


Co-expression Network