G875735


Basic Information

Item Value
gene id G875735
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 29497025 ~ 29497250 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU996814
tcatactatataATAATGTCCCGGATTTCGaaacaaatcttgtctgctaaattaactagtgtagcccacagccaattggcatagccagatcaggacacAACCTAAGAACTCAacagtatgctattctgttcttctgaaataggctacattttcttaatatcatgcttctttagacctgtcaaAAACACattatggatttattgtgatggtgtaggctatatattac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU996814 True 226 lncRNA 0.35 1 29497025 29497250

Neighbor

gene id symbol gene type direction distance location
LOC118936921 NA coding upstream 256832 29231527 ~ 29240203 (+)
rars1 syrc coding upstream 767658 28699373 ~ 28729367 (+)
LOC110533610 wwc1 coding upstream 803133 28648562 ~ 28693892 (+)
LOC110533607 LOC106603487 coding upstream 855311 28635794 ~ 28641714 (+)
LOC110533604 LOC106603483 coding upstream 953758 28419323 ~ 28543267 (+)
gemin5 LOC106603490 coding downstream 9023 29506273 ~ 29525563 (+)
LOC118966731 NA coding downstream 89202 29586452 ~ 29629500 (+)
LOC110533617 LOC106603494 coding downstream 186025 29683275 ~ 29785295 (+)
LOC110533618 LOC106603495 coding downstream 307022 29804272 ~ 29836898 (+)
LOC100653448 flt2 coding downstream 346771 29844021 ~ 29881548 (+)
G875703 NA non-coding upstream 35707 29460989 ~ 29461318 (+)
G875702 NA non-coding upstream 36316 29460412 ~ 29460709 (+)
G875625 NA non-coding upstream 94732 29401981 ~ 29402293 (+)
G875624 NA non-coding upstream 96714 29400108 ~ 29400311 (+)
G875619 NA non-coding upstream 98450 29398321 ~ 29398575 (+)
G875736 NA non-coding downstream 342 29497592 ~ 29497801 (+)
G875740 NA non-coding downstream 6628 29503878 ~ 29504351 (+)
G875955 NA non-coding downstream 156638 29653888 ~ 29654160 (+)
G875962 NA non-coding downstream 161688 29658938 ~ 29659300 (+)
G875972 NA non-coding downstream 166872 29664122 ~ 29664327 (+)
G874876 NA other upstream 666861 28829772 ~ 28830164 (+)
G874510 NA other upstream 758120 28727774 ~ 28738905 (+)
G874378 NA other upstream 912610 28577452 ~ 28584415 (+)
G874438 LOC106603484 other upstream 939381 28556540 ~ 28557644 (+)
LOC110533598 LOC106603479 other upstream 1326772 28162794 ~ 28171287 (+)
G875756 LOC106603491 other downstream 49389 29546639 ~ 29547275 (+)
G875776 NA other downstream 83876 29581126 ~ 29582530 (+)
LOC110533619 LOC106603497 other downstream 422026 29919276 ~ 29986082 (+)
G876079 ubb other downstream 523391 30020641 ~ 30050053 (+)
LOC110533629 LOC106603502 other downstream 523841 30021091 ~ 30022290 (+)

Expression


Co-expression Network