G875972


Basic Information

Item Value
gene id G875972
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 29664122 ~ 29664327 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU997063
CTCTTCCATAGCCTGCACAAGAGGCCTGCGCACAAAGGGCTGCCGGTGGATGGTGGAGGACACCATGCGTATTGGAGATGGCAGCGCACATTGTGATGTTCCCACCACGTTGGCCAGGAATATCTATAATGGCTCTGTGGCCAATGACGTTTCTCCCACTTCTTCTGGTCTTTGCTAGGttgaacccagcctcatctataaaGATG

Function

NR:

description
uncharacterized protein LOC111195047

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU997063 True 206 lncRNA 0.52 1 29664122 29664327

Neighbor

gene id symbol gene type direction distance location
LOC118966731 NA coding upstream 34622 29586452 ~ 29629500 (+)
gemin5 LOC106603490 coding upstream 138559 29506273 ~ 29525563 (+)
LOC118936921 NA coding upstream 423929 29231527 ~ 29240203 (+)
rars1 syrc coding upstream 934755 28699373 ~ 28729367 (+)
LOC110533610 wwc1 coding upstream 970230 28648562 ~ 28693892 (+)
LOC110533617 LOC106603494 coding downstream 18948 29683275 ~ 29785295 (+)
LOC110533618 LOC106603495 coding downstream 139945 29804272 ~ 29836898 (+)
LOC100653448 flt2 coding downstream 179694 29844021 ~ 29881548 (+)
LOC110533623 NA coding downstream 224972 29889260 ~ 29917633 (+)
LOC110533619 LOC106603497 coding downstream 257726 29919276 ~ 29986082 (+)
G875962 NA non-coding upstream 4822 29658938 ~ 29659300 (+)
G875955 NA non-coding upstream 9962 29653888 ~ 29654160 (+)
G875740 NA non-coding upstream 159771 29503878 ~ 29504351 (+)
G875736 NA non-coding upstream 166321 29497592 ~ 29497801 (+)
G875735 NA non-coding upstream 166872 29497025 ~ 29497250 (+)
G876014 NA non-coding downstream 37918 29702245 ~ 29702508 (+)
G876016 NA non-coding downstream 40842 29705169 ~ 29705437 (+)
G876018 NA non-coding downstream 44135 29708462 ~ 29708745 (+)
G876024 NA non-coding downstream 49375 29713702 ~ 29713907 (+)
G876025 NA non-coding downstream 50286 29714613 ~ 29714864 (+)
G875776 NA other upstream 81592 29581126 ~ 29582530 (+)
G875756 LOC106603491 other upstream 116847 29546639 ~ 29547275 (+)
G874876 NA other upstream 833958 28829772 ~ 28830164 (+)
G874510 NA other upstream 925217 28727774 ~ 28738905 (+)
G874378 NA other upstream 1079707 28577452 ~ 28584415 (+)
G876079 ubb other downstream 356314 30020641 ~ 30050053 (+)
LOC110533629 LOC106603502 other downstream 356764 30021091 ~ 30022290 (+)
LOC110533640 LOC106603515 other downstream 1084179 30748439 ~ 30771331 (+)
G877809 NA other downstream 1540756 31205083 ~ 31205418 (+)

Expression


Co-expression Network