G876018


Basic Information

Item Value
gene id G876018
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 29708462 ~ 29708745 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU997109
GTGTAGTTTGTTTCCCCTCGCTCATGAACTTTGATAGTCAAGAATATGTTTTGCATGTTTTTGTTTCCCTTACAATAAATGTGATATAGTTCTAGTAAATAAGACCGTCCTGTAACAGCTTCCTTTTACAAAGTAAAAGGTAAGAGAATGGTACCAACCTGCAAGGCGCGTGGTGAAGTTATTAACATGAACACCAACGCTAATAAATAGATATAACACAAACTCATCGCCCATTCATCCATCTGTGATTCATtcagtaaggagagagagagacgcattaGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU997109 True 284 lncRNA 0.38 1 29708462 29708745

Neighbor

gene id symbol gene type direction distance location
LOC118966731 NA coding upstream 78962 29586452 ~ 29629500 (+)
gemin5 LOC106603490 coding upstream 182899 29506273 ~ 29525563 (+)
LOC118936921 NA coding upstream 468269 29231527 ~ 29240203 (+)
rars1 syrc coding upstream 979095 28699373 ~ 28729367 (+)
LOC110533610 wwc1 coding upstream 1014570 28648562 ~ 28693892 (+)
LOC110533618 LOC106603495 coding downstream 95527 29804272 ~ 29836898 (+)
LOC100653448 flt2 coding downstream 135276 29844021 ~ 29881548 (+)
LOC110533623 NA coding downstream 180554 29889260 ~ 29917633 (+)
LOC110533619 LOC106603497 coding downstream 213308 29919276 ~ 29986082 (+)
LOC110533629 LOC106603502 coding downstream 312745 30021091 ~ 30022290 (+)
G876016 NA non-coding upstream 3025 29705169 ~ 29705437 (+)
G876014 NA non-coding upstream 5954 29702245 ~ 29702508 (+)
G875972 NA non-coding upstream 44135 29664122 ~ 29664327 (+)
G875962 NA non-coding upstream 49162 29658938 ~ 29659300 (+)
G875955 NA non-coding upstream 54302 29653888 ~ 29654160 (+)
G876024 NA non-coding downstream 4957 29713702 ~ 29713907 (+)
G876025 NA non-coding downstream 5868 29714613 ~ 29714864 (+)
G876032 NA non-coding downstream 12536 29721281 ~ 29725221 (+)
G876033 NA non-coding downstream 17724 29726469 ~ 29726758 (+)
G876060 NA non-coding downstream 57844 29766589 ~ 29766842 (+)
G875776 NA other upstream 125932 29581126 ~ 29582530 (+)
G875756 LOC106603491 other upstream 161187 29546639 ~ 29547275 (+)
G874876 NA other upstream 878298 28829772 ~ 28830164 (+)
G874510 NA other upstream 969557 28727774 ~ 28738905 (+)
G874378 NA other upstream 1124047 28577452 ~ 28584415 (+)
G876079 ubb other downstream 311896 30020641 ~ 30050053 (+)
LOC110533640 LOC106603515 other downstream 1039761 30748439 ~ 30771331 (+)
G877809 NA other downstream 1496338 31205083 ~ 31205418 (+)

Expression


Co-expression Network