G876084


Basic Information

Item Value
gene id G876084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 29904762 ~ 29905984 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU997189
GAGTCTGTGAACAATGTGGTAGGGTTGGAGACGTGCTGGCTGTTGTAAACCAGAGCAGCGCGGTAATAGAAAGCAACCAATGCCCTTAATTAACACTTTTTTCTTCAAGAGAGAGGACAACGCAGACAGACCAGACAAGGAGGTTTATTCATTTAGGCAATGTCATCATGGGACATTGTTCGTTAGTCTTGTATCCTGGACAGGATATCATCATATACTGTAAGTTCGTTATGGTGACACTACAGTATAGATGATGTACTATCCAGGGTCTCATTCCCCCTCCGGATACTATCACCACACACACAAGCTGTTGACGGTTGGAAGCTAGACGGTGGCAATCTAACCGTTACCATTACTGAGTTTTAGCAATGGTAAGGGTTCTATTGACGCCTCTCAATGTCATAGCTACAATAGTATACACATGGACGGATGCTGCTGGCGGTTGGAAGCTAGAAGGTGGCACTCAAACCGTTACCATTACTGAGTTTTAGTAATGGTAAGGGTTCTAATGCTGCTTCTCAATGTCATCTGGAGTTGCATTAAAGGAAACTTAAAACTGGTGGACTGGTCTCATCTTCCTTGCAAGAAGTCGCATTTGATTACAACACCTTAGTGATACCAAGAGCCAAAGTTGTGTTTAAGAGCTGATTTTGATATTGTAAGATGTTTGTTGACTTGTGAAataatgtttaaaaataaaaaccaaaGAATGACTATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU997189 True 720 lncRNA 0.41 2 29904762 29905984

Neighbor

gene id symbol gene type direction distance location
LOC110533623 NA coding upstream 4186 29889260 ~ 29917633 (+)
LOC100653448 flt2 coding upstream 23214 29844021 ~ 29881548 (+)
LOC110533618 LOC106603495 coding upstream 69663 29804272 ~ 29836898 (+)
LOC110533617 LOC106603494 coding upstream 119467 29683275 ~ 29785295 (+)
LOC118966731 NA coding upstream 275262 29586452 ~ 29629500 (+)
LOC110533619 LOC106603497 coding downstream 16069 29919276 ~ 29986082 (+)
LOC110533629 LOC106603502 coding downstream 115506 30021091 ~ 30022290 (+)
LOC110533631 LOC106603505 coding downstream 175096 30081080 ~ 30199949 (+)
LOC110533637 LOC106603512 coding downstream 554916 30460900 ~ 30463978 (+)
LOC110533640 LOC106603515 coding downstream 842455 30748439 ~ 30771331 (+)
G876060 NA non-coding upstream 137920 29766589 ~ 29766842 (+)
G876033 NA non-coding upstream 178004 29726469 ~ 29726758 (+)
G876094 NA non-coding downstream 140354 30046338 ~ 30079512 (+)
G876079 ubb non-coding downstream 142144 30020641 ~ 30050053 (+)
G876209 NA non-coding downstream 307381 30213365 ~ 30213938 (+)
G876284 NA non-coding downstream 359364 30265348 ~ 30265826 (+)
G875776 NA other upstream 322232 29581126 ~ 29582530 (+)
G875756 LOC106603491 other upstream 357487 29546639 ~ 29547275 (+)
G874876 NA other upstream 1074598 28829772 ~ 28830164 (+)
G874510 NA other upstream 1165857 28727774 ~ 28738905 (+)
G874378 NA other upstream 1320347 28577452 ~ 28584415 (+)
G877809 NA other downstream 1299099 31205083 ~ 31205418 (+)

Expression


Co-expression Network