G876398


Basic Information

Item Value
gene id G876398
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 30417673 ~ 30426916 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU997522
GTGTGAAGTTACTCTCCTGTCTGGTATAACTCACCCTGCTGAGGCGCAGGTCTGTGGCCAGGGTGTTGGAGGACCTGGATGTCTTGATGCCTGTAGCTGTGGTGGAAGTGGTGgtagagagggcgagggagactTGCTTGGCCCTCTCTTGAAGCCCTGGCTTGGGTAGCCCCACCTTGGCGGAACCCCCTTTCAGCATGGCTCTGTCTGCTATACCTGCAgAGAAACAAAACGCACTGGTCTTGAGCAGCCTCACGCACAAAGTGTTTTGATGACTCCTTCCCAGAAACTGACCCTGCCCTGTAAACAGTACCTCCCACTATAGAGGCACTGACTACAGACAGAGTTGAGTTGGACAGACTACACACAAAGCACTGCGACTAGAGGGCAATGCGACAGCCAGACCTCTGGTTCAGAGAGGCACTGAGAAAGAGCAGCAGGGCCAAGAGCAGTTCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU997522 True 457 lncRNA 0.55 2 30417673 30426916

Neighbor

gene id symbol gene type direction distance location
LOC110533631 LOC106603505 coding upstream 217724 30081080 ~ 30199949 (+)
LOC110533629 LOC106603502 coding upstream 395383 30021091 ~ 30022290 (+)
LOC110533619 LOC106603497 coding upstream 435325 29919276 ~ 29986082 (+)
LOC110533623 NA coding upstream 517097 29889260 ~ 29917633 (+)
LOC100653448 flt2 coding upstream 536125 29844021 ~ 29881548 (+)
LOC110533637 LOC106603512 coding downstream 33984 30460900 ~ 30463978 (+)
LOC110533640 LOC106603515 coding downstream 321523 30748439 ~ 30771331 (+)
LOC110533641 LOC106603516 coding downstream 344537 30771453 ~ 30950758 (+)
LOC118937065 NA coding downstream 483187 30910103 ~ 30910156 (+)
LOC110533644 LOC106603518 coding downstream 545777 30972693 ~ 31020075 (+)
G876361 NA non-coding upstream 27935 30369252 ~ 30389738 (+)
G876296 NA non-coding upstream 134561 30282887 ~ 30283112 (+)
G876295 NA non-coding upstream 137665 30279742 ~ 30280008 (+)
G876284 NA non-coding upstream 151847 30265348 ~ 30265826 (+)
G876209 NA non-coding upstream 203735 30213365 ~ 30213938 (+)
G876410 NA non-coding downstream 7430 30434346 ~ 30434575 (+)
G876424 NA non-coding downstream 32234 30459150 ~ 30459372 (+)
G876601 NA non-coding downstream 297296 30724212 ~ 30725822 (+)
G876813 NA non-coding downstream 654356 31081272 ~ 31081812 (+)
LOC110533645 LOC106603519 non-coding downstream 692919 31021959 ~ 31124747 (+)
G876079 ubb other upstream 367620 30020641 ~ 30050053 (+)
G875776 NA other upstream 835143 29581126 ~ 29582530 (+)
G875756 LOC106603491 other upstream 870398 29546639 ~ 29547275 (+)
G877809 NA other downstream 778167 31205083 ~ 31205418 (+)
LOC110534883 med13 other downstream 814894 31241426 ~ 31382578 (+)
LOC110533671 LOC106603546 other downstream 2554950 32981866 ~ 33045499 (+)
LOC110533672 LOC106603547 other downstream 2704229 33130843 ~ 33140211 (+)

Expression


Co-expression Network