Gene
RNA
| Item | Value |
|---|---|
| gene id | G877793 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 31192832 ~ 31193045 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU999034 | True | 214 | lncRNA | 0.40 | 1 | 31192832 | 31193045 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533646 | LOC106603521 | coding | upstream | 39358 | 31132784 ~ 31153474 (+) |
| LOC110533645 | LOC106603519 | coding | upstream | 68085 | 31021959 ~ 31124747 (+) |
| LOC110533644 | LOC106603518 | coding | upstream | 172757 | 30972693 ~ 31020075 (+) |
| LOC110533641 | LOC106603516 | coding | upstream | 242074 | 30771453 ~ 30950758 (+) |
| LOC110534883 | med13 | coding | downstream | 48381 | 31241426 ~ 31382578 (+) |
| LOC110534886 | ints2 | coding | downstream | 193175 | 31386220 ~ 31452883 (+) |
| LOC110533651 | LOC106603524 | coding | downstream | 551544 | 31744589 ~ 32229047 (+) |
| LOC110533658 | LOC106603532 | coding | downstream | 1292963 | 32486008 ~ 32488013 (+) |
| LOC110533659 | NA | coding | downstream | 1300672 | 32493717 ~ 32497386 (+) |
| G877787 | LOC100380853 | non-coding | upstream | 7407 | 31185112 ~ 31185425 (+) |
| G877783 | NA | non-coding | upstream | 15156 | 31177446 ~ 31177676 (+) |
| G877782 | NA | non-coding | upstream | 15570 | 31176973 ~ 31177262 (+) |
| G877807 | NA | non-coding | downstream | 10947 | 31203992 ~ 31204242 (+) |
| G877894 | NA | non-coding | downstream | 114395 | 31307440 ~ 31326530 (+) |
| G877888 | NA | non-coding | downstream | 154849 | 31347894 ~ 31348422 (+) |
| G877987 | NA | non-coding | downstream | 296805 | 31489850 ~ 31510231 (+) |
| LOC110533640 | LOC106603515 | other | upstream | 437176 | 30748439 ~ 30771331 (+) |
| G876079 | ubb | other | upstream | 1142779 | 30020641 ~ 30050053 (+) |
| LOC110533629 | LOC106603502 | other | upstream | 1170542 | 30021091 ~ 30022290 (+) |
| LOC110533619 | LOC106603497 | other | upstream | 1212202 | 29919276 ~ 29986082 (+) |
| G875776 | NA | other | upstream | 1610302 | 29581126 ~ 29582530 (+) |
| G877809 | NA | other | downstream | 12038 | 31205083 ~ 31205418 (+) |
| LOC110533671 | LOC106603546 | other | downstream | 1788821 | 32981866 ~ 33045499 (+) |
| LOC110533672 | LOC106603547 | other | downstream | 1938100 | 33130843 ~ 33140211 (+) |
| G880069 | NA | other | downstream | 2107720 | 33300765 ~ 33301738 (+) |
