G877987


Basic Information

Item Value
gene id G877987
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 31489850 ~ 31510231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU999250
caacaacacagagttacacatggagtgaacaataaacaagtcaataacacagttgtcatgtattgtcatgttgtgtctttctgtcctttcctttcaccctgtctccctctgctggtcgtactaggttaccgtttctgtccctctttcccccagctgttccttgtcttctctgactacctcattcaccccttttcccacctgttcccttttttccctctgattaggtccctatatctctctctgtttctgctcctgtccttgtcgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU999250 True 265 lncRNA 0.46 2 31489850 31510231

Neighbor

gene id symbol gene type direction distance location
LOC110534886 ints2 coding upstream 36967 31386220 ~ 31452883 (+)
LOC110534883 med13 coding upstream 107272 31241426 ~ 31382578 (+)
LOC110533646 LOC106603521 coding upstream 336376 31132784 ~ 31153474 (+)
LOC110533645 LOC106603519 coding upstream 365103 31021959 ~ 31124747 (+)
LOC110533644 LOC106603518 coding upstream 469775 30972693 ~ 31020075 (+)
LOC110533651 LOC106603524 coding downstream 234358 31744589 ~ 32229047 (+)
LOC110533658 LOC106603532 coding downstream 975777 32486008 ~ 32488013 (+)
LOC110533659 NA coding downstream 983486 32493717 ~ 32497386 (+)
LOC110534887 LOC106603535 coding downstream 995138 32505369 ~ 32519387 (+)
LOC110533662 mog2a coding downstream 1055659 32565890 ~ 32591366 (+)
G877888 NA non-coding upstream 141428 31347894 ~ 31348422 (+)
G877894 NA non-coding upstream 163320 31307440 ~ 31326530 (+)
G877807 NA non-coding upstream 285608 31203992 ~ 31204242 (+)
G877793 NA non-coding upstream 296805 31192832 ~ 31193045 (+)
G878375 NA non-coding downstream 593876 32104107 ~ 32112074 (+)
G878376 NA non-coding downstream 594162 32104393 ~ 32112730 (+)
G878378 NA non-coding downstream 597000 32107231 ~ 32115152 (+)
G878479 NA non-coding downstream 730758 32240989 ~ 32241240 (+)
G877809 NA other upstream 284432 31205083 ~ 31205418 (+)
LOC110533640 LOC106603515 other upstream 734194 30748439 ~ 30771331 (+)
G876079 ubb other upstream 1439797 30020641 ~ 30050053 (+)
LOC110533671 LOC106603546 other downstream 1471635 32981866 ~ 33045499 (+)
LOC110533672 LOC106603547 other downstream 1620914 33130843 ~ 33140211 (+)
G880069 NA other downstream 1790534 33300765 ~ 33301738 (+)
LOC110533688 NA other downstream 2534263 34044472 ~ 34047724 (+)
hsd20b2 LOC106603577 other downstream 2924311 34422538 ~ 34435620 (+)

Expression


Co-expression Network