Gene
RNA
| Item | Value |
|---|---|
| gene id | G879440 |
| gene name | LOC106603524 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 32225432 ~ 32225936 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: autism susceptibility gene 2 protein-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1000802 | True | 321 | TUCP | 0.56 | 2 | 32225432 | 32225936 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533647 | LOC106603522 | coding | downstream | 1064922 | 31154471 ~ 31160510 (-) |
| LOC110534882 | NA | coding | downstream | 1203207 | 31021462 ~ 31022225 (-) |
| LOC110533642 | LOC106603612 | coding | downstream | 1267237 | 30954608 ~ 30958195 (-) |
| LOC110533638 | aspa | coding | downstream | 1483648 | 30737046 ~ 30741784 (-) |
| aspa | aspa | coding | downstream | 1488682 | 30724154 ~ 30736750 (-) |
| LOC110533652 | LOC106603525 | coding | upstream | 21055 | 32246991 ~ 32353202 (-) |
| LOC110533653 | LOC106603526 | coding | upstream | 127981 | 32353917 ~ 32356646 (-) |
| LOC110533654 | LOC106603527 | coding | upstream | 142750 | 32368686 ~ 32422880 (-) |
| LOC110533655 | LOC106603528 | coding | upstream | 206950 | 32432886 ~ 32447490 (-) |
| LOC110533657 | LOC106567954 | coding | upstream | 236623 | 32462559 ~ 32485561 (-) |
| G879371 | NA | non-coding | downstream | 111151 | 32106240 ~ 32114281 (-) |
| G879269 | NA | non-coding | downstream | 248870 | 31929936 ~ 31976562 (-) |
| G879295 | NA | non-coding | downstream | 253211 | 31970613 ~ 31972221 (-) |
| G878917 | NA | non-coding | downstream | 869035 | 31352071 ~ 31356397 (-) |
| G878908 | NA | non-coding | downstream | 882216 | 31342372 ~ 31343216 (-) |
| G879453 | NA | non-coding | upstream | 17085 | 32243021 ~ 32243247 (-) |
| G879515 | NA | non-coding | upstream | 162533 | 32388469 ~ 32418267 (-) |
| G879557 | NA | non-coding | upstream | 223017 | 32448953 ~ 32452117 (-) |
| G879580 | NA | non-coding | upstream | 296303 | 32522239 ~ 32522461 (-) |
| G879619 | NA | non-coding | upstream | 365529 | 32591465 ~ 32595689 (-) |
| G878962 | NA | other | downstream | 776269 | 31447482 ~ 31449163 (-) |
| LOC110533621 | NA | other | downstream | 2308927 | 29906094 ~ 29922728 (-) |
| G875194 | NA | other | downstream | 3240362 | 28941240 ~ 28985070 (-) |
| G874706 | NA | other | downstream | 3682165 | 28540229 ~ 28543267 (-) |
| G873784 | LOC106573797 | other | downstream | 4641170 | 27582929 ~ 27584262 (-) |
| G879617 | NA | other | upstream | 359955 | 32585891 ~ 32588838 (-) |
| G879763 | NA | other | upstream | 564431 | 32790367 ~ 32790802 (-) |
| G880718 | LOC106603546 | other | upstream | 810227 | 33036163 ~ 33037883 (-) |
| LOC110533673 | NA | other | upstream | 928034 | 33153970 ~ 33251521 (-) |
