G879617


Basic Information

Item Value
gene id G879617
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 32585891 ~ 32588838 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1001001
ATGGTTGAGAACAGGAATAATCCGAGTAAATTATGGAATTGTCTGAAGCTGTTGGGTTACAGTAACAGACTGAAGAACAAAACTTAGCTTGGACATTGGAGGAAAGGTTACATCAGACAAGATCATGGTTGCAGACAGTCTGAATAGCTACGTTACAACTATAGCTAAAATTACAGCAGTTTTACTAGCAGCAAGGGATTCAAGTCGATGCTTTTTCATTTGAAAAAGTGTCTGAGTCAACTGCGTAACTCACATTGTAAATCTGTATATTGAACTAGGCATTTTTCCCAGTGAACTAAAACATGCAAGGGACATTCCTCTATATAATGAAAATAATAACTGTCGGCCTGTCTCAATCCTGTGTATTTTATCGAAGGTCATGGAAAATATTATGTTCGAGCATATTGAGTTATATTTCCTTACATAACCGACTATATGAGCTCCAGTCTGGCTTTAGGAAATCCCATTCCACTGACACTTGCCTACTATATCTAACTGACCCCATCAGGAAGGAAGTAGATGGTGGGCCATTTTGTGCTATGGTTATGTTAGAtctccaaaaagcatttgatacAGTGGATCATGAGTTTCTGTTCATCAAACGAAGAGCCATGAGCTTTAACAACTTAGCCATGAATGGGTTATCTCTTATCTGATAGGAAAAAAACAGATGATGCACTGTATGTGGATGGGACCCGGTCTAAAACCAAAATCTTGAACTTTGGGAACCCTAAGGGAATGTGCTGTGTCCACTTTTATTTCTGTTGTATATAAATTATCTGAAATCTGCCTGTACATGTGACCTTTTCCTCTATGCAGATAATTCTTTATGGTTTCCCATAAAGACAAACATGTATCTGCTTCTCATCTCTTGCGTTGGGCATTACAcagggagggggagcgggagccgGCGTGAAACcaactccaattcacataccacaccaactgatccacagatgacgcaatctcaatcacactccacactgccctttcccacctggacaaaaggagcacctatgtgagaatgctgttcattgactacagcaaagcgttcaacatcatagtacccacaaagctcatcactaaactaaggaccctgggactaaacacctccctctgcaactggatcctggatttcctgacaggccgccgCCAGGTGGTAAggctagacaacaacacatctgccacgctgatcctcaacacaagagcccctcaggggtgtgtgcttagtcccctcctgtactccctgttcacccactactgcgtggccaagcacaactccaacaccataattaagtttgctgatgacacaacgacAATGATGAAACAGactagggaggaggtcagagacctggcagcgtGGTGCCAGGCCaacaatgtgagcaagacaaagtagCTGATCGTTGACTAttggaaaaggagggccaaacaggcccccattaacaacGACTGGGCTgaatggagcgggtcgagagtatAAGGACAtgaggcgagacccaaatgcagacacaggcaGATGattgagctccgatatttattataacaaaaggCGTTGGCAAAGGGCAGGTTAGGTACAGgggagagttcataaaccaggtcagagtccaaacagtaccaggcgataggcagcctcaaggtcaggacaggcagggttTCAGTAACCAGGTCCCGAGTCCAGACGGTACAAGACGataggcaggcttgaggtcaagGCAGGAAGAAAGGTCAGAGGGTTTggtgtcaggacaggcaagggtcaaaaccaggagggctaggaaaaacagagactgggaaaaataggagcaaggagaaaaacgctggttgacttggcaaaacaagacgaactggcacagagagacaggaaacacagggataaatacactggggataataagcgacacctggagggggtggagacaagcacaaggacaggtgaaacagatcagggcgtgacagagagtttcaagttccttggtgtccacatcaccaacaaactataatggtccaaacacaccaagacagttgtgaagagggtatgacaacaccttttccccctcaggagaatgaaaagattgggatgggtccccagatcctcaaaaagttctacagctgcatcactgAGAGCATCCTGATCGGTTCCATCACCGCCTAGTATAGCAACTGTTTGGCATGtgaccataaggcactacagagggta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1001001 True 2197 TUCP 0.46 2 32585891 32588838

Neighbor

gene id symbol gene type direction distance location
LOC110533661 LOC106603536 coding downstream 28499 32524426 ~ 32557392 (-)
LOC110533656 LOC106603531 coding downstream 89152 32488327 ~ 32496739 (-)
LOC110533657 LOC106567954 coding downstream 100330 32462559 ~ 32485561 (-)
LOC110533655 LOC106603528 coding downstream 138401 32432886 ~ 32447490 (-)
LOC110533654 LOC106603527 coding downstream 163011 32368686 ~ 32422880 (-)
LOC110533665 LOC106603540 coding upstream 287401 32876239 ~ 32911266 (-)
LOC110533666 LOC106603541 coding upstream 344893 32933731 ~ 32952352 (-)
LOC110533667 LOC106603542 coding upstream 371829 32960667 ~ 32967754 (-)
LOC110533668 LOC106603543 coding upstream 384579 32973417 ~ 32977176 (-)
LOC110533669 LOC106603544 coding upstream 394870 32983708 ~ 32992688 (-)
G879580 NA non-coding downstream 63430 32522239 ~ 32522461 (-)
G879557 NA non-coding downstream 133774 32448953 ~ 32452117 (-)
G879515 NA non-coding downstream 167624 32388469 ~ 32418267 (-)
G879453 NA non-coding downstream 342644 32243021 ~ 32243247 (-)
G879371 NA non-coding downstream 471610 32106240 ~ 32114281 (-)
G879619 NA non-coding upstream 2627 32591465 ~ 32595689 (-)
G879622 NA non-coding upstream 12995 32601833 ~ 32602619 (-)
G879623 NA non-coding upstream 16813 32605651 ~ 32609567 (-)
G879615 LOC106603538 non-coding upstream 41509 32630347 ~ 32632526 (-)
G879636 NA non-coding upstream 44602 32633440 ~ 32654345 (-)
LOC110533652 LOC106603525 other downstream 336678 32246991 ~ 32353202 (-)
G879440 LOC106603524 other downstream 359955 32225432 ~ 32225936 (-)
G878962 NA other downstream 1136728 31447482 ~ 31449163 (-)
LOC110533621 NA other downstream 2669386 29906094 ~ 29922728 (-)
G875194 NA other downstream 3600821 28941240 ~ 28985070 (-)
G879763 NA other upstream 201529 32790367 ~ 32790802 (-)
G880718 LOC106603546 other upstream 447325 33036163 ~ 33037883 (-)
LOC110533673 NA other upstream 565132 33153970 ~ 33251521 (-)
G880807 NA other upstream 574074 33162912 ~ 33165022 (-)
G880994 NA other upstream 1024487 33613325 ~ 33678839 (-)

Expression


Co-expression Network