Gene
RNA
| Item | Value |
|---|---|
| gene id | G879844 |
| gene name | LOC106603544 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 32983645 ~ 32990813 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1001243 | True | 961 | lncRNA | 0.47 | 8 | 32983645 | 32990813 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533664 | LOC106603537 | coding | upstream | 203713 | 32639570 ~ 32779932 (+) |
| LOC110533663 | LOC106603538 | coding | upstream | 348550 | 32599894 ~ 32635095 (+) |
| LOC110533662 | mog2a | coding | upstream | 392279 | 32565890 ~ 32591366 (+) |
| LOC110534887 | LOC106603535 | coding | upstream | 464258 | 32505369 ~ 32519387 (+) |
| LOC110533659 | NA | coding | upstream | 486259 | 32493717 ~ 32497386 (+) |
| LOC110533671 | LOC106603546 | coding | downstream | 18574 | 32981866 ~ 33045499 (+) |
| LOC110534913 | LOC106603425 | coding | downstream | 70598 | 33061411 ~ 33063183 (+) |
| LOC110533672 | LOC106603547 | coding | downstream | 140030 | 33130843 ~ 33140211 (+) |
| samsn1b | LOC106603553 | coding | downstream | 477551 | 33468364 ~ 33492333 (+) |
| serpinh1a | serph | coding | downstream | 562495 | 33553308 ~ 33557914 (+) |
| G879853 | NA | non-coding | upstream | 21032 | 32960875 ~ 32962613 (+) |
| G879879 | NA | non-coding | upstream | 31336 | 32952039 ~ 32952309 (+) |
| G879877 | NA | non-coding | upstream | 36980 | 32946445 ~ 32946665 (+) |
| G879846 | LOC106603541 | non-coding | upstream | 47030 | 32934196 ~ 32936615 (+) |
| G879832 | NA | non-coding | upstream | 80976 | 32876245 ~ 32902669 (+) |
| G879914 | NA | non-coding | downstream | 62004 | 33052817 ~ 33053058 (+) |
| G880032 | NA | non-coding | downstream | 263862 | 33254675 ~ 33255017 (+) |
| G880068 | LOC106603551 | non-coding | downstream | 306401 | 33297214 ~ 33298232 (+) |
| G880080 | NA | non-coding | downstream | 333159 | 33323972 ~ 33324235 (+) |
| LOC110534883 | med13 | other | upstream | 1661045 | 31241426 ~ 31382578 (+) |
| G877809 | NA | other | upstream | 1778227 | 31205083 ~ 31205418 (+) |
| LOC110533640 | LOC106603515 | other | upstream | 2227989 | 30748439 ~ 30771331 (+) |
| G876079 | ubb | other | upstream | 2933592 | 30020641 ~ 30050053 (+) |
| G880069 | NA | other | downstream | 309952 | 33300765 ~ 33301738 (+) |
| LOC110533688 | NA | other | downstream | 1053681 | 34044472 ~ 34047724 (+) |
| hsd20b2 | LOC106603577 | other | downstream | 1443729 | 34422538 ~ 34435620 (+) |
| LOC110533705 | LOC106603578 | other | downstream | 1446527 | 34437126 ~ 34443357 (+) |
