Gene
RNA
| Item | Value |
|---|---|
| gene id | G879914 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 33052817 ~ 33053058 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1001319 | True | 242 | lncRNA | 0.32 | 1 | 33052817 | 33053058 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533671 | LOC106603546 | coding | upstream | 11803 | 32981866 ~ 33045499 (+) |
| LOC110533664 | LOC106603537 | coding | upstream | 272885 | 32639570 ~ 32779932 (+) |
| LOC110533663 | LOC106603538 | coding | upstream | 417722 | 32599894 ~ 32635095 (+) |
| LOC110533662 | mog2a | coding | upstream | 461451 | 32565890 ~ 32591366 (+) |
| LOC110534887 | LOC106603535 | coding | upstream | 533430 | 32505369 ~ 32519387 (+) |
| LOC110534913 | LOC106603425 | coding | downstream | 8353 | 33061411 ~ 33063183 (+) |
| LOC110533672 | LOC106603547 | coding | downstream | 77785 | 33130843 ~ 33140211 (+) |
| samsn1b | LOC106603553 | coding | downstream | 415306 | 33468364 ~ 33492333 (+) |
| serpinh1a | serph | coding | downstream | 500250 | 33553308 ~ 33557914 (+) |
| LOC110533682 | NA | coding | downstream | 515379 | 33568437 ~ 33569230 (+) |
| G879844 | LOC106603544 | non-coding | upstream | 62004 | 32983645 ~ 32990813 (+) |
| G879853 | NA | non-coding | upstream | 90204 | 32960875 ~ 32962613 (+) |
| G879879 | NA | non-coding | upstream | 100508 | 32952039 ~ 32952309 (+) |
| G879877 | NA | non-coding | upstream | 106152 | 32946445 ~ 32946665 (+) |
| G880032 | NA | non-coding | downstream | 201617 | 33254675 ~ 33255017 (+) |
| G880068 | LOC106603551 | non-coding | downstream | 244156 | 33297214 ~ 33298232 (+) |
| G880080 | NA | non-coding | downstream | 270914 | 33323972 ~ 33324235 (+) |
| G880091 | NA | non-coding | downstream | 296522 | 33349580 ~ 33349805 (+) |
| G880092 | NA | non-coding | downstream | 296756 | 33349814 ~ 33350044 (+) |
| LOC110534883 | med13 | other | upstream | 1730217 | 31241426 ~ 31382578 (+) |
| G877809 | NA | other | upstream | 1847399 | 31205083 ~ 31205418 (+) |
| LOC110533640 | LOC106603515 | other | upstream | 2297161 | 30748439 ~ 30771331 (+) |
| G876079 | ubb | other | upstream | 3002764 | 30020641 ~ 30050053 (+) |
| G880069 | NA | other | downstream | 247707 | 33300765 ~ 33301738 (+) |
| LOC110533688 | NA | other | downstream | 991436 | 34044472 ~ 34047724 (+) |
| hsd20b2 | LOC106603577 | other | downstream | 1381484 | 34422538 ~ 34435620 (+) |
| LOC110533705 | LOC106603578 | other | downstream | 1384282 | 34437126 ~ 34443357 (+) |
