Gene
RNA
| Item | Value |
|---|---|
| gene id | G880068 |
| gene name | LOC106603551 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 33297214 ~ 33298232 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ubiquitin carboxyl-terminal hydrolase 25-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1001480 | True | 757 | lncRNA | 0.48 | 2 | 33297214 | 33298232 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533672 | LOC106603547 | coding | upstream | 157003 | 33130843 ~ 33140211 (+) |
| LOC110534913 | LOC106603425 | coding | upstream | 234031 | 33061411 ~ 33063183 (+) |
| LOC110533671 | LOC106603546 | coding | upstream | 256200 | 32981866 ~ 33045499 (+) |
| LOC110533664 | LOC106603537 | coding | upstream | 517282 | 32639570 ~ 32779932 (+) |
| LOC110533663 | LOC106603538 | coding | upstream | 662119 | 32599894 ~ 32635095 (+) |
| samsn1b | LOC106603553 | coding | downstream | 170132 | 33468364 ~ 33492333 (+) |
| serpinh1a | serph | coding | downstream | 255076 | 33553308 ~ 33557914 (+) |
| LOC110533682 | NA | coding | downstream | 270205 | 33568437 ~ 33569230 (+) |
| acer3 | LOC106603557 | coding | downstream | 277177 | 33575409 ~ 33593092 (+) |
| LOC100136017 | mmp13 | coding | downstream | 318152 | 33616384 ~ 33621122 (+) |
| G880032 | NA | non-coding | upstream | 42197 | 33254675 ~ 33255017 (+) |
| G879914 | NA | non-coding | upstream | 244156 | 33052817 ~ 33053058 (+) |
| G879844 | LOC106603544 | non-coding | upstream | 306401 | 32983645 ~ 32990813 (+) |
| G879853 | NA | non-coding | upstream | 334601 | 32960875 ~ 32962613 (+) |
| G880080 | NA | non-coding | downstream | 25740 | 33323972 ~ 33324235 (+) |
| G880091 | NA | non-coding | downstream | 51348 | 33349580 ~ 33349805 (+) |
| G880092 | NA | non-coding | downstream | 51582 | 33349814 ~ 33350044 (+) |
| G880093 | NA | non-coding | downstream | 51974 | 33350206 ~ 33350501 (+) |
| G880094 | NA | non-coding | downstream | 52448 | 33350680 ~ 33350990 (+) |
| LOC110534883 | med13 | other | upstream | 1974614 | 31241426 ~ 31382578 (+) |
| G877809 | NA | other | upstream | 2091796 | 31205083 ~ 31205418 (+) |
| LOC110533640 | LOC106603515 | other | upstream | 2541558 | 30748439 ~ 30771331 (+) |
| G880069 | NA | other | downstream | 2533 | 33300765 ~ 33301738 (+) |
| LOC110533688 | NA | other | downstream | 746262 | 34044472 ~ 34047724 (+) |
| hsd20b2 | LOC106603577 | other | downstream | 1136310 | 34422538 ~ 34435620 (+) |
| LOC110533705 | LOC106603578 | other | downstream | 1139108 | 34437126 ~ 34443357 (+) |
| rnasekb | rnasek | other | downstream | 1160562 | 34458769 ~ 34472268 (+) |
