G880069


Basic Information

Item Value
gene id G880069
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 33300765 ~ 33301738 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1001481
gagaggcagagagcgaggcagagagagcgagaggggcagagagcgagagagaggcagagagcgagagagaggcagagagcgagagagaggcagagagcgagagagaggcagagagcgagagagaggcagagagcgagagagaggcagagagcgagagagaggcagagagcgagagagaggcagagagcgagagagaggcagagagcgagagagagaggcagagagcgaggcagagagagcgaagagagTGAGATGggcgcagagagagagcgagagagagcgagagggacgcagagagagagcgagagagagcgagagggacgcagagagagagcgagagaggcagagagcgagagagagaggcagagagcgagagagagaggcagagagcgagagagagaggcagagagcgagagagagaggcagagagcgagagagaggggcagagagcgagagagaggggcagagagcgagagagagaggcagagagcgagagagcgaggcagagagcgagagagagaggcagagagaggcagagagcgagagagagagaggcagagagcgagagagagagaggcagagagcgaggcagagagagcgagaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1001481 True 606 TUCP 0.62 3 33300765 33301738

Neighbor

gene id symbol gene type direction distance location
LOC110533672 LOC106603547 coding upstream 160554 33130843 ~ 33140211 (+)
LOC110534913 LOC106603425 coding upstream 237582 33061411 ~ 33063183 (+)
LOC110533671 LOC106603546 coding upstream 259751 32981866 ~ 33045499 (+)
LOC110533664 LOC106603537 coding upstream 520833 32639570 ~ 32779932 (+)
LOC110533663 LOC106603538 coding upstream 665670 32599894 ~ 32635095 (+)
samsn1b LOC106603553 coding downstream 166626 33468364 ~ 33492333 (+)
serpinh1a serph coding downstream 251570 33553308 ~ 33557914 (+)
LOC110533682 NA coding downstream 266699 33568437 ~ 33569230 (+)
acer3 LOC106603557 coding downstream 273671 33575409 ~ 33593092 (+)
LOC100136017 mmp13 coding downstream 314646 33616384 ~ 33621122 (+)
G880068 LOC106603551 non-coding upstream 2533 33297214 ~ 33298232 (+)
G880032 NA non-coding upstream 45748 33254675 ~ 33255017 (+)
G879914 NA non-coding upstream 247707 33052817 ~ 33053058 (+)
G879844 LOC106603544 non-coding upstream 309952 32983645 ~ 32990813 (+)
G880080 NA non-coding downstream 22234 33323972 ~ 33324235 (+)
G880091 NA non-coding downstream 47842 33349580 ~ 33349805 (+)
G880092 NA non-coding downstream 48076 33349814 ~ 33350044 (+)
G880093 NA non-coding downstream 48468 33350206 ~ 33350501 (+)
G880094 NA non-coding downstream 48942 33350680 ~ 33350990 (+)
LOC110534883 med13 other upstream 1978165 31241426 ~ 31382578 (+)
G877809 NA other upstream 2095347 31205083 ~ 31205418 (+)
LOC110533640 LOC106603515 other upstream 2545109 30748439 ~ 30771331 (+)
LOC110533688 NA other downstream 742756 34044472 ~ 34047724 (+)
hsd20b2 LOC106603577 other downstream 1132804 34422538 ~ 34435620 (+)
LOC110533705 LOC106603578 other downstream 1135602 34437126 ~ 34443357 (+)
rnasekb rnasek other downstream 1157056 34458769 ~ 34472268 (+)
LOC110534915 rps17 other downstream 1185082 34486712 ~ 34488757 (+)

Expression


Co-expression Network