Gene
RNA
| Item | Value |
|---|---|
| gene id | G880091 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 33349580 ~ 33349805 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1001505 | True | 226 | lncRNA | 0.42 | 1 | 33349580 | 33349805 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533672 | LOC106603547 | coding | upstream | 209369 | 33130843 ~ 33140211 (+) |
| LOC110534913 | LOC106603425 | coding | upstream | 286397 | 33061411 ~ 33063183 (+) |
| LOC110533671 | LOC106603546 | coding | upstream | 308566 | 32981866 ~ 33045499 (+) |
| LOC110533664 | LOC106603537 | coding | upstream | 569648 | 32639570 ~ 32779932 (+) |
| LOC110533663 | LOC106603538 | coding | upstream | 714485 | 32599894 ~ 32635095 (+) |
| samsn1b | LOC106603553 | coding | downstream | 118559 | 33468364 ~ 33492333 (+) |
| serpinh1a | serph | coding | downstream | 203503 | 33553308 ~ 33557914 (+) |
| LOC110533682 | NA | coding | downstream | 218632 | 33568437 ~ 33569230 (+) |
| acer3 | LOC106603557 | coding | downstream | 225604 | 33575409 ~ 33593092 (+) |
| LOC100136017 | mmp13 | coding | downstream | 266579 | 33616384 ~ 33621122 (+) |
| G880080 | NA | non-coding | upstream | 25345 | 33323972 ~ 33324235 (+) |
| G880068 | LOC106603551 | non-coding | upstream | 51348 | 33297214 ~ 33298232 (+) |
| G880032 | NA | non-coding | upstream | 94563 | 33254675 ~ 33255017 (+) |
| G879914 | NA | non-coding | upstream | 296522 | 33052817 ~ 33053058 (+) |
| G880092 | NA | non-coding | downstream | 9 | 33349814 ~ 33350044 (+) |
| G880093 | NA | non-coding | downstream | 401 | 33350206 ~ 33350501 (+) |
| G880094 | NA | non-coding | downstream | 875 | 33350680 ~ 33350990 (+) |
| G880095 | NA | non-coding | downstream | 1195 | 33351000 ~ 33351286 (+) |
| G880100 | NA | non-coding | downstream | 6725 | 33356530 ~ 33356939 (+) |
| G880069 | NA | other | upstream | 47842 | 33300765 ~ 33301738 (+) |
| LOC110534883 | med13 | other | upstream | 2026980 | 31241426 ~ 31382578 (+) |
| G877809 | NA | other | upstream | 2144162 | 31205083 ~ 31205418 (+) |
| LOC110533688 | NA | other | downstream | 694689 | 34044472 ~ 34047724 (+) |
| hsd20b2 | LOC106603577 | other | downstream | 1084737 | 34422538 ~ 34435620 (+) |
| LOC110533705 | LOC106603578 | other | downstream | 1087535 | 34437126 ~ 34443357 (+) |
| rnasekb | rnasek | other | downstream | 1108989 | 34458769 ~ 34472268 (+) |
| LOC110534915 | rps17 | other | downstream | 1137015 | 34486712 ~ 34488757 (+) |
