Gene
RNA
| Item | Value |
|---|---|
| gene id | G880100 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 33356530 ~ 33356939 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1001514 | True | 410 | lncRNA | 0.45 | 1 | 33356530 | 33356939 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533672 | LOC106603547 | coding | upstream | 216319 | 33130843 ~ 33140211 (+) |
| LOC110534913 | LOC106603425 | coding | upstream | 293347 | 33061411 ~ 33063183 (+) |
| LOC110533671 | LOC106603546 | coding | upstream | 315516 | 32981866 ~ 33045499 (+) |
| LOC110533664 | LOC106603537 | coding | upstream | 576598 | 32639570 ~ 32779932 (+) |
| LOC110533663 | LOC106603538 | coding | upstream | 721435 | 32599894 ~ 32635095 (+) |
| samsn1b | LOC106603553 | coding | downstream | 111425 | 33468364 ~ 33492333 (+) |
| serpinh1a | serph | coding | downstream | 196369 | 33553308 ~ 33557914 (+) |
| LOC110533682 | NA | coding | downstream | 211498 | 33568437 ~ 33569230 (+) |
| acer3 | LOC106603557 | coding | downstream | 218470 | 33575409 ~ 33593092 (+) |
| LOC100136017 | mmp13 | coding | downstream | 259445 | 33616384 ~ 33621122 (+) |
| G880095 | NA | non-coding | upstream | 5244 | 33351000 ~ 33351286 (+) |
| G880094 | NA | non-coding | upstream | 5540 | 33350680 ~ 33350990 (+) |
| G880093 | NA | non-coding | upstream | 6029 | 33350206 ~ 33350501 (+) |
| G880092 | NA | non-coding | upstream | 6486 | 33349814 ~ 33350044 (+) |
| G880091 | NA | non-coding | upstream | 6725 | 33349580 ~ 33349805 (+) |
| G880101 | NA | non-coding | downstream | 212 | 33357151 ~ 33357490 (+) |
| G880104 | NA | non-coding | downstream | 3198 | 33360137 ~ 33360661 (+) |
| G880105 | NA | non-coding | downstream | 3914 | 33360853 ~ 33361192 (+) |
| G880107 | NA | non-coding | downstream | 5837 | 33362776 ~ 33362998 (+) |
| G880108 | NA | non-coding | downstream | 6556 | 33363495 ~ 33363696 (+) |
| G880069 | NA | other | upstream | 54792 | 33300765 ~ 33301738 (+) |
| LOC110534883 | med13 | other | upstream | 2033930 | 31241426 ~ 31382578 (+) |
| G877809 | NA | other | upstream | 2151112 | 31205083 ~ 31205418 (+) |
| LOC110533688 | NA | other | downstream | 687555 | 34044472 ~ 34047724 (+) |
| hsd20b2 | LOC106603577 | other | downstream | 1077603 | 34422538 ~ 34435620 (+) |
| LOC110533705 | LOC106603578 | other | downstream | 1080401 | 34437126 ~ 34443357 (+) |
| rnasekb | rnasek | other | downstream | 1101855 | 34458769 ~ 34472268 (+) |
| LOC110534915 | rps17 | other | downstream | 1129881 | 34486712 ~ 34488757 (+) |
