Gene
RNA
| Item | Value |
|---|---|
| gene id | G880125 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 33380299 ~ 33380810 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1001539 | True | 512 | lncRNA | 0.40 | 1 | 33380299 | 33380810 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533672 | LOC106603547 | coding | upstream | 240088 | 33130843 ~ 33140211 (+) |
| LOC110534913 | LOC106603425 | coding | upstream | 317116 | 33061411 ~ 33063183 (+) |
| LOC110533671 | LOC106603546 | coding | upstream | 339285 | 32981866 ~ 33045499 (+) |
| LOC110533664 | LOC106603537 | coding | upstream | 600367 | 32639570 ~ 32779932 (+) |
| LOC110533663 | LOC106603538 | coding | upstream | 745204 | 32599894 ~ 32635095 (+) |
| samsn1b | LOC106603553 | coding | downstream | 87554 | 33468364 ~ 33492333 (+) |
| serpinh1a | serph | coding | downstream | 172498 | 33553308 ~ 33557914 (+) |
| LOC110533682 | NA | coding | downstream | 187627 | 33568437 ~ 33569230 (+) |
| acer3 | LOC106603557 | coding | downstream | 194599 | 33575409 ~ 33593092 (+) |
| LOC100136017 | mmp13 | coding | downstream | 235574 | 33616384 ~ 33621122 (+) |
| G880123 | NA | non-coding | upstream | 1733 | 33378174 ~ 33378566 (+) |
| G880121 | NA | non-coding | upstream | 4942 | 33375126 ~ 33375357 (+) |
| G880120 | NA | non-coding | upstream | 6491 | 33373582 ~ 33373808 (+) |
| G880119 | NA | non-coding | upstream | 7706 | 33372368 ~ 33372593 (+) |
| G880117 | NA | non-coding | upstream | 8799 | 33371139 ~ 33371500 (+) |
| G880126 | NA | non-coding | downstream | 753 | 33381563 ~ 33382062 (+) |
| G880127 | NA | non-coding | downstream | 1910 | 33382720 ~ 33382921 (+) |
| G880128 | NA | non-coding | downstream | 2298 | 33383108 ~ 33383425 (+) |
| G880131 | NA | non-coding | downstream | 4500 | 33385310 ~ 33385687 (+) |
| G880134 | NA | non-coding | downstream | 9152 | 33389962 ~ 33390459 (+) |
| G880069 | NA | other | upstream | 78561 | 33300765 ~ 33301738 (+) |
| LOC110534883 | med13 | other | upstream | 2057699 | 31241426 ~ 31382578 (+) |
| G877809 | NA | other | upstream | 2174881 | 31205083 ~ 31205418 (+) |
| LOC110533688 | NA | other | downstream | 663684 | 34044472 ~ 34047724 (+) |
| hsd20b2 | LOC106603577 | other | downstream | 1053732 | 34422538 ~ 34435620 (+) |
| LOC110533705 | LOC106603578 | other | downstream | 1056530 | 34437126 ~ 34443357 (+) |
| rnasekb | rnasek | other | downstream | 1077984 | 34458769 ~ 34472268 (+) |
| LOC110534915 | rps17 | other | downstream | 1106010 | 34486712 ~ 34488757 (+) |
