Gene
RNA
| Item | Value |
|---|---|
| gene id | G880140 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 33398823 ~ 33399050 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1001554 | True | 228 | lncRNA | 0.45 | 1 | 33398823 | 33399050 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533672 | LOC106603547 | coding | upstream | 258612 | 33130843 ~ 33140211 (+) |
| LOC110534913 | LOC106603425 | coding | upstream | 335640 | 33061411 ~ 33063183 (+) |
| LOC110533671 | LOC106603546 | coding | upstream | 357809 | 32981866 ~ 33045499 (+) |
| LOC110533664 | LOC106603537 | coding | upstream | 618891 | 32639570 ~ 32779932 (+) |
| LOC110533663 | LOC106603538 | coding | upstream | 763728 | 32599894 ~ 32635095 (+) |
| samsn1b | LOC106603553 | coding | downstream | 69314 | 33468364 ~ 33492333 (+) |
| serpinh1a | serph | coding | downstream | 154258 | 33553308 ~ 33557914 (+) |
| LOC110533682 | NA | coding | downstream | 169387 | 33568437 ~ 33569230 (+) |
| acer3 | LOC106603557 | coding | downstream | 176359 | 33575409 ~ 33593092 (+) |
| LOC100136017 | mmp13 | coding | downstream | 217334 | 33616384 ~ 33621122 (+) |
| G880136 | NA | non-coding | upstream | 5718 | 33392622 ~ 33393105 (+) |
| G880134 | NA | non-coding | upstream | 8364 | 33389962 ~ 33390459 (+) |
| G880131 | NA | non-coding | upstream | 13136 | 33385310 ~ 33385687 (+) |
| G880128 | NA | non-coding | upstream | 15398 | 33383108 ~ 33383425 (+) |
| G880127 | NA | non-coding | upstream | 15902 | 33382720 ~ 33382921 (+) |
| G880147 | NA | non-coding | downstream | 8154 | 33407204 ~ 33407459 (+) |
| G880148 | NA | non-coding | downstream | 10510 | 33409560 ~ 33409817 (+) |
| G880151 | NA | non-coding | downstream | 14277 | 33413327 ~ 33413603 (+) |
| G880152 | NA | non-coding | downstream | 14646 | 33413696 ~ 33413936 (+) |
| G880069 | NA | other | upstream | 97085 | 33300765 ~ 33301738 (+) |
| LOC110534883 | med13 | other | upstream | 2076223 | 31241426 ~ 31382578 (+) |
| G877809 | NA | other | upstream | 2193405 | 31205083 ~ 31205418 (+) |
| LOC110533688 | NA | other | downstream | 645444 | 34044472 ~ 34047724 (+) |
| hsd20b2 | LOC106603577 | other | downstream | 1035492 | 34422538 ~ 34435620 (+) |
| LOC110533705 | LOC106603578 | other | downstream | 1038290 | 34437126 ~ 34443357 (+) |
| rnasekb | rnasek | other | downstream | 1059744 | 34458769 ~ 34472268 (+) |
| LOC110534915 | rps17 | other | downstream | 1087770 | 34486712 ~ 34488757 (+) |
