G880994


Basic Information

Item Value
gene id G880994
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 33613325 ~ 33678839 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1002474
TAAAAACATAACACTTTATTTTGTGTCAATTAATACTTTATATTATCATACACAGGTTCATAAAAATGAGAAAAGGCTCTGATCATGTAAAACAAAAAAGGTATGACCAAAACATGGATTTATGTGTGTGCAAGTATGCAGAGTACAGTATTCCCTTTCAAAATAACAATTCCTGCATACCTTTCCTCAACATGATAAAAATATCTTaataaaaaaatgtcaaataGATATTCCCTGAAAACTTAAATATTAGAAGTCAACAGGCACAAAAAATATCTGAAAGCAGTGTACATGTAATGTATTCAAAAGCTTTATTTCAGACAGGTGAATTTGATAAGCAACAGTGTGCGTCTTCATTGGCATCTCCATCAATTCTTCTGCAAGGAAattcaaaatgtataaaacatgttttaaagtaataatCTTAATTTTATTGGTCCTATATATGCTGCACTGATTGGTGACTCaatgatttacatttttttttaatgtaaaaaaataaaaataaatgtatatatcCTCTTTGCCTATCTTTTCTTACAATAATTCACTTTCTGTTATCATTGTCCTACTGTTAGTACCTACCTGCATTTGTTCATATATCCAGGGGAGGAAGTGGGTGACATTGCCATAGATTCCTGGTTTGTTCTTCAGGGCACAACCTATACCCCAGCTAGTGTCCCCTACCAGCCACCATACTGAACCCTCCTTGGCCACCATTGGTCCTCCACTGTCCCCCTGCAAGACACAAGAAGTTACCCGCTACCCCTCCTATGTTAGCATTACAAAATGGGACCATAACTTTAACATGGTGCATTTGGAATGTACAGTCAACttcatcagatttgccaccaatactccttataggacacatcactgcactctatactactctgtaaactggtcatctctgtataccagtcgcaagacccactggttgatgcttatttataaaaccctcttagcgCTCACTAACTGATAatcctactgcagccctcatcctccacatacaacaaccgttctgccagtcacattctgttaaaggtccccaaagcacacacattcctGGGTCACTCTtgttttcagttcactgcagctagcgactggaacgagctgcaaagaaacactcaaactggacagttttatctccatctcttcattcaaagactcaatcatggacactcttgcttacagttgtggctgctttgcgtgatgttgtctctaccttcctgcctttgtgctgttgtctgtgcccaatagtgtttgtaccatgttttgtgctgctaccatattgtgttgctaccatgttgttgttatgtggtgCTGCTACCAtactatgttgtcatgtgttgctgccattctTAGGTCtccctttatgtagtgttgtggtgtctctcttgtcgtgatgtgtgttatgtcctatatttttatttttaattctagcccccgtccccgcaggaggccttttggtaggccatcattgtatataaaaatgtgttcttaactgacttgccttgttgaataaaatgttaaataaataaatacaaaataaaacaaaagtattcagaccacttcactttttccacattttgttactttacagccttattctaaaatgtataaaaaatgcaaaacatcctcatcaatctacacacaataccccataatggcaaagcgaaaacaggtttttagaaacagAAACCTTATTTGCATAACTATTATTTACATATGACCCTTTAATATGAGactcctgtttcctgtttccattgatcatccttgagatgtttgtacaacttgattggagtctgtggtaaattcaattgatttgacatgatttcaaaaggcaaacacctgtctttataaggtcccacagttgacagtgcatgtcagagcaaaaaccaagccatgaggtcgaaggaattgtccgtagagctccgtgacaggattgtgtcgaggcacagatctggtgaaggatACCTAAACAtttcagcaacattgaaggtccccaagaacacagtggcctccatcattcttaaatggaagaagactcttccgagagctgaccaagaacccgatggtcactctgacagagctccagagtacctctgtggagattggaaaaccttccagaaggacaaccatctctgcagcactccaccaaatcaggctttcatggtagagtggccagacggaagtccctcctcaggaaaaggcacatgacagcctgcttggagtttgccaaaaaagcacctaaaggacctaaaggcctgaatgccaagtgtcacgcctggaggaaacctgacatcatatgtactgtgaagcatggtggtggcagcatcctgctgtggggatgtttttcagcagtagggactgggagactagtcaggatcgagggaaagatgaatggagcaaagtacagagagatccttgatgaaaacctgatccagaatgctcaggaactcagactggggcgacggttccccttccaacaggacaacgatcctaagcacacagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1002474 True 2515 TUCP 0.40 2 33613325 33678839

Neighbor

gene id symbol gene type direction distance location
LOC110533683 serph coding downstream 36871 33555433 ~ 33576454 (-)
LOC110533678 LOC106603555 coding downstream 67813 33494333 ~ 33545512 (-)
LOC110533676 LOC106603552 coding downstream 214248 33341342 ~ 33399077 (-)
LOC110533674 LOC106603551 coding downstream 295054 33257944 ~ 33318271 (-)
LOC110533673 NA coding downstream 427426 33153970 ~ 33251521 (-)
LOC110533687 NA coding upstream 260596 33939072 ~ 33973312 (-)
LOC110534889 NA coding upstream 506095 34184934 ~ 34185439 (-)
LOC110534891 LOC106567904 coding upstream 533748 34212587 ~ 34217566 (-)
LOC110534914 LOC106603428 coding upstream 546109 34224948 ~ 34225889 (-)
LOC110534892 LOC106603428 coding upstream 554297 34233136 ~ 34234195 (-)
G880984 NA non-coding downstream 10899 33599090 ~ 33602426 (-)
G880980 NA non-coding downstream 20272 33590618 ~ 33593053 (-)
G880933 NA non-coding downstream 61083 33471839 ~ 33552242 (-)
G880776 NA non-coding downstream 119134 33492508 ~ 33494191 (-)
G881090 NA non-coding upstream 79723 33758562 ~ 33759801 (-)
G881183 LOC106603559 non-coding upstream 215781 33894620 ~ 33895120 (-)
G881242 NA non-coding upstream 305771 33984610 ~ 33984880 (-)
G881243 NA non-coding upstream 306682 33985521 ~ 33985778 (-)
G881250 NA non-coding upstream 312719 33991558 ~ 33991770 (-)
G880807 NA other downstream 448303 33162912 ~ 33165022 (-)
G880718 LOC106603546 other downstream 575442 33036163 ~ 33037883 (-)
G879763 NA other downstream 822523 32790367 ~ 32790802 (-)
G879617 NA other downstream 1024487 32585891 ~ 32588838 (-)
G881778 NA other upstream 734224 34413063 ~ 34417261 (-)
LOC110533714 rbmx2 other upstream 913483 34589717 ~ 34596263 (-)
LOC110534894 gpr119 other upstream 919528 34597247 ~ 34599007 (-)
LOC110533718 LOC106603592 other upstream 1214140 34891059 ~ 34893957 (-)

Expression


Co-expression Network