Gene
RNA
| Item | Value |
|---|---|
| gene id | G880559 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 34085556 ~ 34085979 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1002009 | True | 424 | lncRNA | 0.33 | 1 | 34085556 | 34085979 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533688 | NA | coding | upstream | 37850 | 34044472 ~ 34047724 (+) |
| dscama | LOC105030490 | coding | upstream | 172140 | 33730265 ~ 33913890 (+) |
| LOC118936922 | NA | coding | upstream | 382845 | 33700572 ~ 33702711 (+) |
| tmprss2 | tmps2 | coding | upstream | 406706 | 33665119 ~ 33678850 (+) |
| acat1 | acat1 | coding | upstream | 438244 | 33630484 ~ 33647312 (+) |
| LOC110533689 | NA | coding | downstream | 3758 | 34089737 ~ 34120835 (+) |
| LOC110533691 | LOC106603565 | coding | downstream | 36742 | 34122721 ~ 34141656 (+) |
| LOC110533692 | LOC106603566 | coding | downstream | 96033 | 34182012 ~ 34184477 (+) |
| LOC110534890 | LOC106603566 | coding | downstream | 123825 | 34209804 ~ 34211775 (+) |
| LOC110533694 | LOC106603569 | coding | downstream | 213414 | 34299393 ~ 34322532 (+) |
| G880558 | NA | non-coding | upstream | 2156 | 34083060 ~ 34083400 (+) |
| G880556 | NA | non-coding | upstream | 4230 | 34081114 ~ 34081326 (+) |
| G880497 | NA | non-coding | upstream | 98898 | 33986457 ~ 33986658 (+) |
| G880468 | NA | non-coding | upstream | 112332 | 33939435 ~ 33973224 (+) |
| G880560 | NA | non-coding | downstream | 882 | 34086861 ~ 34087082 (+) |
| G881377 | NA | non-coding | downstream | 102950 | 34188929 ~ 34189163 (+) |
| G881379 | NA | non-coding | downstream | 103953 | 34189932 ~ 34190181 (+) |
| G881409 | NA | non-coding | downstream | 126310 | 34212289 ~ 34212568 (+) |
| G881449 | NA | non-coding | downstream | 181889 | 34267868 ~ 34268370 (+) |
| G880069 | NA | other | upstream | 783818 | 33300765 ~ 33301738 (+) |
| LOC110533672 | LOC106603547 | other | upstream | 950642 | 33130843 ~ 33140211 (+) |
| LOC110533671 | LOC106603546 | other | upstream | 1040057 | 32981866 ~ 33045499 (+) |
| LOC110534883 | med13 | other | upstream | 2762956 | 31241426 ~ 31382578 (+) |
| hsd20b2 | LOC106603577 | other | downstream | 348563 | 34422538 ~ 34435620 (+) |
| LOC110533705 | LOC106603578 | other | downstream | 351361 | 34437126 ~ 34443357 (+) |
| rnasekb | rnasek | other | downstream | 372815 | 34458769 ~ 34472268 (+) |
| LOC110534915 | rps17 | other | downstream | 400841 | 34486712 ~ 34488757 (+) |
| G881536 | NA | other | downstream | 403841 | 34489820 ~ 34494101 (+) |
