Gene
RNA
| Item | Value |
|---|---|
| gene id | G880560 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 34086861 ~ 34087082 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1002010 | True | 222 | lncRNA | 0.35 | 1 | 34086861 | 34087082 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533688 | NA | coding | upstream | 39155 | 34044472 ~ 34047724 (+) |
| dscama | LOC105030490 | coding | upstream | 173445 | 33730265 ~ 33913890 (+) |
| LOC118936922 | NA | coding | upstream | 384150 | 33700572 ~ 33702711 (+) |
| tmprss2 | tmps2 | coding | upstream | 408011 | 33665119 ~ 33678850 (+) |
| acat1 | acat1 | coding | upstream | 439549 | 33630484 ~ 33647312 (+) |
| LOC110533689 | NA | coding | downstream | 2655 | 34089737 ~ 34120835 (+) |
| LOC110533691 | LOC106603565 | coding | downstream | 35639 | 34122721 ~ 34141656 (+) |
| LOC110533692 | LOC106603566 | coding | downstream | 94930 | 34182012 ~ 34184477 (+) |
| LOC110534890 | LOC106603566 | coding | downstream | 122722 | 34209804 ~ 34211775 (+) |
| LOC110533694 | LOC106603569 | coding | downstream | 212311 | 34299393 ~ 34322532 (+) |
| G880559 | NA | non-coding | upstream | 882 | 34085556 ~ 34085979 (+) |
| G880558 | NA | non-coding | upstream | 3461 | 34083060 ~ 34083400 (+) |
| G880556 | NA | non-coding | upstream | 5535 | 34081114 ~ 34081326 (+) |
| G880497 | NA | non-coding | upstream | 100203 | 33986457 ~ 33986658 (+) |
| G880468 | NA | non-coding | upstream | 113637 | 33939435 ~ 33973224 (+) |
| G881377 | NA | non-coding | downstream | 101847 | 34188929 ~ 34189163 (+) |
| G881379 | NA | non-coding | downstream | 102850 | 34189932 ~ 34190181 (+) |
| G881409 | NA | non-coding | downstream | 125207 | 34212289 ~ 34212568 (+) |
| G881449 | NA | non-coding | downstream | 180786 | 34267868 ~ 34268370 (+) |
| G881480 | NA | non-coding | downstream | 235864 | 34322946 ~ 34328278 (+) |
| G880069 | NA | other | upstream | 785123 | 33300765 ~ 33301738 (+) |
| LOC110533672 | LOC106603547 | other | upstream | 951947 | 33130843 ~ 33140211 (+) |
| LOC110533671 | LOC106603546 | other | upstream | 1041362 | 32981866 ~ 33045499 (+) |
| LOC110534883 | med13 | other | upstream | 2764261 | 31241426 ~ 31382578 (+) |
| hsd20b2 | LOC106603577 | other | downstream | 347460 | 34422538 ~ 34435620 (+) |
| LOC110533705 | LOC106603578 | other | downstream | 350258 | 34437126 ~ 34443357 (+) |
| rnasekb | rnasek | other | downstream | 371712 | 34458769 ~ 34472268 (+) |
| LOC110534915 | rps17 | other | downstream | 399738 | 34486712 ~ 34488757 (+) |
| G881536 | NA | other | downstream | 402738 | 34489820 ~ 34494101 (+) |
