Gene
RNA
| Item | Value |
|---|---|
| gene id | G881323 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 34117245 ~ 34125631 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1002834 | False | 441 | lncRNA | 0.44 | 2 | 34117245 | 34125631 |
| TU1002835 | True | 441 | lncRNA | 0.44 | 2 | 34117245 | 34125631 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533687 | NA | coding | downstream | 143956 | 33939072 ~ 33973312 (-) |
| LOC110533683 | serph | coding | downstream | 540791 | 33555433 ~ 33576454 (-) |
| LOC110533678 | LOC106603555 | coding | downstream | 571733 | 33494333 ~ 33545512 (-) |
| LOC110533676 | LOC106603552 | coding | downstream | 718168 | 33341342 ~ 33399077 (-) |
| LOC110533674 | LOC106603551 | coding | downstream | 798974 | 33257944 ~ 33318271 (-) |
| LOC110534889 | NA | coding | upstream | 59303 | 34184934 ~ 34185439 (-) |
| LOC110534891 | LOC106567904 | coding | upstream | 86956 | 34212587 ~ 34217566 (-) |
| LOC110534914 | LOC106603428 | coding | upstream | 99317 | 34224948 ~ 34225889 (-) |
| LOC110534892 | LOC106603428 | coding | upstream | 107505 | 34233136 ~ 34234195 (-) |
| LOC110534893 | LOC106603570 | coding | upstream | 121846 | 34247477 ~ 34248415 (-) |
| G881302 | NA | non-coding | downstream | 31363 | 34085637 ~ 34085882 (-) |
| G881297 | NA | non-coding | downstream | 39276 | 34077631 ~ 34077969 (-) |
| G881177 | NA | non-coding | downstream | 69539 | 34046206 ~ 34047706 (-) |
| G881179 | NA | non-coding | downstream | 73247 | 34034805 ~ 34043998 (-) |
| G881250 | NA | non-coding | downstream | 125475 | 33991558 ~ 33991770 (-) |
| G881340 | NA | non-coding | upstream | 24519 | 34150150 ~ 34150356 (-) |
| G881380 | NA | non-coding | upstream | 64276 | 34189907 ~ 34190128 (-) |
| G881384 | NA | non-coding | upstream | 67467 | 34193098 ~ 34193452 (-) |
| G881398 | NA | non-coding | upstream | 81300 | 34206931 ~ 34207160 (-) |
| G881754 | NA | non-coding | upstream | 208470 | 34334101 ~ 34334345 (-) |
| G880994 | NA | other | downstream | 438406 | 33613325 ~ 33678839 (-) |
| LOC110533673 | NA | other | downstream | 865724 | 33153970 ~ 33251521 (-) |
| G880807 | NA | other | downstream | 952223 | 33162912 ~ 33165022 (-) |
| G880718 | LOC106603546 | other | downstream | 1079362 | 33036163 ~ 33037883 (-) |
| G881778 | NA | other | upstream | 287432 | 34413063 ~ 34417261 (-) |
| LOC110533714 | rbmx2 | other | upstream | 466691 | 34589717 ~ 34596263 (-) |
| LOC110534894 | gpr119 | other | upstream | 472736 | 34597247 ~ 34599007 (-) |
| LOC110533718 | LOC106603592 | other | upstream | 767348 | 34891059 ~ 34893957 (-) |
| G882578 | NA | other | upstream | 1177283 | 35302914 ~ 35304055 (-) |
