G881379


Basic Information

Item Value
gene id G881379
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 34189932 ~ 34190181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1002899
TTCTTGTTAAGACAATCACGGTGATTGTGTCCTACTTTCTTGCAGTGCCTGCATGGTGCCTCACAATCCCGAGCAAAGTGACCCGACTTGTTACAATTAAAACATCTATcattatctctatctctgtccttaTCTCCTCTTCTGTTAGCCTTCCATCCCTTTCTGTCAGAGCCCTTACTGGCTATCTCACCCAGAGTGGCCATCAAGTATTCTGCCCATTTCAGCTTCTTCTTAGTCTCCTCGCTTTTAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106576475

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1002899 True 250 lncRNA 0.45 1 34189932 34190181

Neighbor

gene id symbol gene type direction distance location
LOC110533692 LOC106603566 coding upstream 5455 34182012 ~ 34184477 (+)
LOC110533691 LOC106603565 coding upstream 48276 34122721 ~ 34141656 (+)
LOC110533689 NA coding upstream 69097 34089737 ~ 34120835 (+)
LOC110533688 NA coding upstream 142226 34044472 ~ 34047724 (+)
dscama LOC105030490 coding upstream 276516 33730265 ~ 33913890 (+)
LOC110534890 LOC106603566 coding downstream 19623 34209804 ~ 34211775 (+)
LOC110533694 LOC106603569 coding downstream 109212 34299393 ~ 34322532 (+)
LOC110533696 slc13a5 coding downstream 175871 34366052 ~ 34377940 (+)
med31 med31 coding downstream 190054 34380235 ~ 34387056 (+)
LOC110533700 LOC106603575 coding downstream 197561 34387742 ~ 34391447 (+)
G881377 NA non-coding upstream 769 34188929 ~ 34189163 (+)
G880560 NA non-coding upstream 102850 34086861 ~ 34087082 (+)
G880559 NA non-coding upstream 103953 34085556 ~ 34085979 (+)
G880558 NA non-coding upstream 106532 34083060 ~ 34083400 (+)
G880556 NA non-coding upstream 108606 34081114 ~ 34081326 (+)
G881409 NA non-coding downstream 22108 34212289 ~ 34212568 (+)
G881449 NA non-coding downstream 77687 34267868 ~ 34268370 (+)
G881480 NA non-coding downstream 132765 34322946 ~ 34328278 (+)
G881486 NA non-coding downstream 141549 34331730 ~ 34332049 (+)
G881488 NA non-coding downstream 142879 34333060 ~ 34333466 (+)
G880069 NA other upstream 888194 33300765 ~ 33301738 (+)
LOC110533672 LOC106603547 other upstream 1055018 33130843 ~ 33140211 (+)
LOC110533671 LOC106603546 other upstream 1144433 32981866 ~ 33045499 (+)
LOC110534883 med13 other upstream 2867332 31241426 ~ 31382578 (+)
hsd20b2 LOC106603577 other downstream 244361 34422538 ~ 34435620 (+)
LOC110533705 LOC106603578 other downstream 247159 34437126 ~ 34443357 (+)
rnasekb rnasek other downstream 268613 34458769 ~ 34472268 (+)
LOC110534915 rps17 other downstream 296639 34486712 ~ 34488757 (+)
G881536 NA other downstream 299639 34489820 ~ 34494101 (+)

Expression


Co-expression Network