Gene
RNA
| Item | Value |
|---|---|
| gene id | G881384 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 34193098 ~ 34193452 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: retrotransposon-like protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1002904 | True | 355 | lncRNA | 0.46 | 1 | 34193098 | 34193452 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534889 | NA | coding | downstream | 7659 | 34184934 ~ 34185439 (-) |
| LOC110533687 | NA | coding | downstream | 219809 | 33939072 ~ 33973312 (-) |
| LOC110533683 | serph | coding | downstream | 616644 | 33555433 ~ 33576454 (-) |
| LOC110533678 | LOC106603555 | coding | downstream | 647586 | 33494333 ~ 33545512 (-) |
| LOC110533676 | LOC106603552 | coding | downstream | 794021 | 33341342 ~ 33399077 (-) |
| LOC110534891 | LOC106567904 | coding | upstream | 19135 | 34212587 ~ 34217566 (-) |
| LOC110534914 | LOC106603428 | coding | upstream | 31496 | 34224948 ~ 34225889 (-) |
| LOC110534892 | LOC106603428 | coding | upstream | 39684 | 34233136 ~ 34234195 (-) |
| LOC110534893 | LOC106603570 | coding | upstream | 54025 | 34247477 ~ 34248415 (-) |
| LOC110533693 | NA | coding | upstream | 76209 | 34269661 ~ 34270652 (-) |
| G881380 | NA | non-coding | downstream | 2970 | 34189907 ~ 34190128 (-) |
| G881340 | NA | non-coding | downstream | 42742 | 34150150 ~ 34150356 (-) |
| G881323 | NA | non-coding | downstream | 67467 | 34117245 ~ 34125631 (-) |
| G881318 | NA | non-coding | downstream | 74319 | 34118305 ~ 34118779 (-) |
| G881302 | NA | non-coding | downstream | 107216 | 34085637 ~ 34085882 (-) |
| G881398 | NA | non-coding | upstream | 13479 | 34206931 ~ 34207160 (-) |
| G881754 | NA | non-coding | upstream | 140649 | 34334101 ~ 34334345 (-) |
| G881755 | NA | non-coding | upstream | 141616 | 34335068 ~ 34335426 (-) |
| G881757 | NA | non-coding | upstream | 142575 | 34336027 ~ 34336346 (-) |
| G881762 | NA | non-coding | upstream | 146908 | 34340360 ~ 34340748 (-) |
| G880994 | NA | other | downstream | 514259 | 33613325 ~ 33678839 (-) |
| LOC110533673 | NA | other | downstream | 941577 | 33153970 ~ 33251521 (-) |
| G880807 | NA | other | downstream | 1028076 | 33162912 ~ 33165022 (-) |
| G880718 | LOC106603546 | other | downstream | 1155215 | 33036163 ~ 33037883 (-) |
| G881778 | NA | other | upstream | 219611 | 34413063 ~ 34417261 (-) |
| LOC110533714 | rbmx2 | other | upstream | 398870 | 34589717 ~ 34596263 (-) |
| LOC110534894 | gpr119 | other | upstream | 404915 | 34597247 ~ 34599007 (-) |
| LOC110533718 | LOC106603592 | other | upstream | 699527 | 34891059 ~ 34893957 (-) |
| G882578 | NA | other | upstream | 1109462 | 35302914 ~ 35304055 (-) |
