G881398



Basic Information


Item Value
gene id G881398
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 34206931 ~ 34207160 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1002918
gtacaTAAATCTTTTAgtaataccacagattctcaattggattgaggtctgggctttaattaggccattccaagacatttaaatgtttcccttaaaccccttgagtgttgctttagcagtatgcttaatgtccttgtcctgctggaagttgaacctccatcccaagtctcaaatctctggaagacaaacaggtttccctcaagaatttcccggTATTTAGCACCATCTAT

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1002918 True 230 lncRNA 0.40 1 34206931 34207160

Neighbor


gene id symbol gene type direction distance location
LOC110534889 NA coding downstream 21492 34184934 ~ 34185439 (-)
LOC110533687 NA coding downstream 233642 33939072 ~ 33973312 (-)
LOC110533683 serph coding downstream 630477 33555433 ~ 33576454 (-)
LOC110533678 LOC106603555 coding downstream 661419 33494333 ~ 33545512 (-)
LOC110533676 LOC106603552 coding downstream 807854 33341342 ~ 33399077 (-)
LOC110534891 LOC106567904 coding upstream 5427 34212587 ~ 34217566 (-)
LOC110534914 LOC106603428 coding upstream 17788 34224948 ~ 34225889 (-)
LOC110534892 LOC106603428 coding upstream 25976 34233136 ~ 34234195 (-)
LOC110534893 LOC106603570 coding upstream 40317 34247477 ~ 34248415 (-)
LOC110533693 NA coding upstream 62501 34269661 ~ 34270652 (-)
G881384 NA non-coding downstream 13479 34193098 ~ 34193452 (-)
G881380 NA non-coding downstream 16803 34189907 ~ 34190128 (-)
G881340 NA non-coding downstream 56575 34150150 ~ 34150356 (-)
G881323 NA non-coding downstream 81300 34117245 ~ 34125631 (-)
G881318 NA non-coding downstream 88152 34118305 ~ 34118779 (-)
G881754 NA non-coding upstream 126941 34334101 ~ 34334345 (-)
G881755 NA non-coding upstream 127908 34335068 ~ 34335426 (-)
G881757 NA non-coding upstream 128867 34336027 ~ 34336346 (-)
G881762 NA non-coding upstream 133200 34340360 ~ 34340748 (-)
G881763 NA non-coding upstream 133662 34340822 ~ 34341143 (-)
G880994 NA other downstream 528092 33613325 ~ 33678839 (-)
LOC110533673 NA other downstream 955410 33153970 ~ 33251521 (-)
G880807 NA other downstream 1041909 33162912 ~ 33165022 (-)
G880718 LOC106603546 other downstream 1169048 33036163 ~ 33037883 (-)
G881778 NA other upstream 205903 34413063 ~ 34417261 (-)
LOC110533714 rbmx2 other upstream 385162 34589717 ~ 34596263 (-)
LOC110534894 gpr119 other upstream 391207 34597247 ~ 34599007 (-)
LOC110533718 LOC106603592 other upstream 685819 34891059 ~ 34893957 (-)
G882578 NA other upstream 1095754 35302914 ~ 35304055 (-)

Expression



Co-expression Network