Gene
RNA
| Item | Value |
|---|---|
| gene id | G881755 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 34335068 ~ 34335426 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1003301 | True | 359 | lncRNA | 0.41 | 1 | 34335068 | 34335426 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533693 | NA | coding | downstream | 64416 | 34269661 ~ 34270652 (-) |
| LOC110534893 | LOC106603570 | coding | downstream | 86653 | 34247477 ~ 34248415 (-) |
| LOC110534892 | LOC106603428 | coding | downstream | 100873 | 34233136 ~ 34234195 (-) |
| LOC110534914 | LOC106603428 | coding | downstream | 109179 | 34224948 ~ 34225889 (-) |
| LOC110534891 | LOC106567904 | coding | downstream | 117502 | 34212587 ~ 34217566 (-) |
| serpinf1 | LOC106603571 | coding | upstream | 14097 | 34349523 ~ 34356204 (-) |
| LOC110533697 | LOC106603572 | coding | upstream | 21069 | 34356495 ~ 34363372 (-) |
| c10h17orf49 | cssa04h17orf49 | coding | upstream | 108143 | 34443569 ~ 34459501 (-) |
| LOC100335039 | LOC100335039 | coding | upstream | 160366 | 34494606 ~ 34560547 (-) |
| ap4m1 | ap4m1 | coding | upstream | 185804 | 34521230 ~ 34528777 (-) |
| G881754 | NA | non-coding | downstream | 723 | 34334101 ~ 34334345 (-) |
| G881398 | NA | non-coding | downstream | 127908 | 34206931 ~ 34207160 (-) |
| G881384 | NA | non-coding | downstream | 141616 | 34193098 ~ 34193452 (-) |
| G881380 | NA | non-coding | downstream | 144940 | 34189907 ~ 34190128 (-) |
| G881340 | NA | non-coding | downstream | 184712 | 34150150 ~ 34150356 (-) |
| G881757 | NA | non-coding | upstream | 601 | 34336027 ~ 34336346 (-) |
| G881762 | NA | non-coding | upstream | 4934 | 34340360 ~ 34340748 (-) |
| G881763 | NA | non-coding | upstream | 5396 | 34340822 ~ 34341143 (-) |
| G881769 | NA | non-coding | upstream | 12832 | 34348258 ~ 34348525 (-) |
| G881774 | NA | non-coding | upstream | 44601 | 34380027 ~ 34380235 (-) |
| LOC110533687 | NA | other | downstream | 361756 | 33939072 ~ 33973312 (-) |
| G880994 | NA | other | downstream | 656229 | 33613325 ~ 33678839 (-) |
| LOC110533673 | NA | other | downstream | 1083547 | 33153970 ~ 33251521 (-) |
| G880807 | NA | other | downstream | 1170046 | 33162912 ~ 33165022 (-) |
| G880718 | LOC106603546 | other | downstream | 1297185 | 33036163 ~ 33037883 (-) |
| G881778 | NA | other | upstream | 77637 | 34413063 ~ 34417261 (-) |
| LOC110533714 | rbmx2 | other | upstream | 256896 | 34589717 ~ 34596263 (-) |
| LOC110534894 | gpr119 | other | upstream | 262941 | 34597247 ~ 34599007 (-) |
| LOC110533718 | LOC106603592 | other | upstream | 557553 | 34891059 ~ 34893957 (-) |
| G882578 | NA | other | upstream | 967488 | 35302914 ~ 35304055 (-) |
