G881762



Basic Information


Item Value
gene id G881762
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 34340360 ~ 34340748 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1003308
ccgtatgtgttatttcatagttttgatgtcttcactattattctacaatgttgaaaatagtaaaataaagaaaaactcttgaataagtacagtgaggagaacaagtatttgaatacactgccgattttgcaggttttcctacttacaaagcatgtagaggtctgtcatttttaatcataggtacacttcaactgtgagagacggaatctaaaacaaaaatccagaaaatcacattgtatgatttttaagtttttgcattttattgcatgacataagtatttgattcatcagaaaagcagaacttaatatttggtacagaaaactTTGTTTGCAATTATAGAGATCAtacttttcctgtagttcttgaccaggtttgcacacactgtagc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1003308 True 389 lncRNA 0.32 1 34340360 34340748

Neighbor


gene id symbol gene type direction distance location
LOC110533693 NA coding downstream 69708 34269661 ~ 34270652 (-)
LOC110534893 LOC106603570 coding downstream 91945 34247477 ~ 34248415 (-)
LOC110534892 LOC106603428 coding downstream 106165 34233136 ~ 34234195 (-)
LOC110534914 LOC106603428 coding downstream 114471 34224948 ~ 34225889 (-)
LOC110534891 LOC106567904 coding downstream 122794 34212587 ~ 34217566 (-)
serpinf1 LOC106603571 coding upstream 8775 34349523 ~ 34356204 (-)
LOC110533697 LOC106603572 coding upstream 15747 34356495 ~ 34363372 (-)
c10h17orf49 cssa04h17orf49 coding upstream 102821 34443569 ~ 34459501 (-)
LOC100335039 LOC100335039 coding upstream 155044 34494606 ~ 34560547 (-)
ap4m1 ap4m1 coding upstream 180482 34521230 ~ 34528777 (-)
G881757 NA non-coding downstream 4014 34336027 ~ 34336346 (-)
G881755 NA non-coding downstream 4934 34335068 ~ 34335426 (-)
G881754 NA non-coding downstream 6015 34334101 ~ 34334345 (-)
G881398 NA non-coding downstream 133200 34206931 ~ 34207160 (-)
G881384 NA non-coding downstream 146908 34193098 ~ 34193452 (-)
G881763 NA non-coding upstream 74 34340822 ~ 34341143 (-)
G881769 NA non-coding upstream 7510 34348258 ~ 34348525 (-)
G881774 NA non-coding upstream 39279 34380027 ~ 34380235 (-)
G881776 med31 non-coding upstream 39508 34380256 ~ 34383153 (-)
G881777 NA non-coding upstream 47373 34388121 ~ 34388350 (-)
LOC110533687 NA other downstream 367048 33939072 ~ 33973312 (-)
G880994 NA other downstream 661521 33613325 ~ 33678839 (-)
LOC110533673 NA other downstream 1088839 33153970 ~ 33251521 (-)
G880807 NA other downstream 1175338 33162912 ~ 33165022 (-)
G880718 LOC106603546 other downstream 1302477 33036163 ~ 33037883 (-)
G881778 NA other upstream 72315 34413063 ~ 34417261 (-)
LOC110533714 rbmx2 other upstream 251574 34589717 ~ 34596263 (-)
LOC110534894 gpr119 other upstream 257619 34597247 ~ 34599007 (-)
LOC110533718 LOC106603592 other upstream 552231 34891059 ~ 34893957 (-)
G882578 NA other upstream 962166 35302914 ~ 35304055 (-)

Expression



Co-expression Network