G881504


Basic Information

Item Value
gene id G881504
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 34397525 ~ 34397781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003037
agaggagtaaaatAATAATGTGAAAGGTGAGAGAAAGTTACTGTTACTGTATGCTAACTGTTTTACTGATGAGTTCATTGGCTACGAGGACAAAGGCAAGAGGGAAGAAACAGGCTGGTATATTTTAAAGTGACAAAGGACAATCTTTCAAAACACCAGAAAACCAGGTAAGATATTATATTTGTACACATTAAATACGCAAAAATATCAATACCACCACAAACATACAGAGAACGATGAATGAGGATTTTTCTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003037 True 257 lncRNA 0.34 1 34397525 34397781

Neighbor

gene id symbol gene type direction distance location
LOC110533701 LOC106603576 coding upstream 291 34391710 ~ 34397234 (+)
LOC110533700 LOC106603575 coding upstream 6078 34387742 ~ 34391447 (+)
med31 med31 coding upstream 10469 34380235 ~ 34387056 (+)
LOC110533696 slc13a5 coding upstream 19585 34366052 ~ 34377940 (+)
LOC110533694 LOC106603569 coding upstream 74993 34299393 ~ 34322532 (+)
hsd20b2 LOC106603577 coding downstream 24757 34422538 ~ 34435620 (+)
LOC110533705 LOC106603578 coding downstream 39345 34437126 ~ 34443357 (+)
rnasekb rnasek coding downstream 60988 34458769 ~ 34472268 (+)
LOC110534915 rps17 coding downstream 88931 34486712 ~ 34488757 (+)
taf9 LOC106603584 coding downstream 130939 34528720 ~ 34535561 (+)
G881498 NA non-coding upstream 31581 34364713 ~ 34365944 (+)
G881499 NA non-coding upstream 33527 34363766 ~ 34363998 (+)
G881488 NA non-coding upstream 64059 34333060 ~ 34333466 (+)
G881486 NA non-coding upstream 65476 34331730 ~ 34332049 (+)
G881507 NA non-coding downstream 1279 34399060 ~ 34399356 (+)
G881531 LOC100194703 non-coding downstream 96774 34494555 ~ 34562820 (+)
G881606 NA non-coding downstream 200346 34598127 ~ 34598341 (+)
G881607 NA non-coding downstream 201758 34599539 ~ 34600021 (+)
G881633 NA non-coding downstream 250766 34648547 ~ 34648928 (+)
LOC110533688 NA other upstream 349801 34044472 ~ 34047724 (+)
G880069 NA other upstream 1095787 33300765 ~ 33301738 (+)
LOC110533672 LOC106603547 other upstream 1262611 33130843 ~ 33140211 (+)
LOC110533671 LOC106603546 other upstream 1352026 32981866 ~ 33045499 (+)
LOC110534883 med13 other upstream 3074925 31241426 ~ 31382578 (+)
G881536 NA other downstream 92039 34489820 ~ 34494101 (+)

Expression


Co-expression Network