G881507


Basic Information

Item Value
gene id G881507
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 34399060 ~ 34399356 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003040
GTACAAATTTCACATGTACATACATTTTCCTTATTGTTAAGACTTGTTTTATTGAGTTTTTACCTGAAATTGTAATAACAGCCTGTAACATTCTGAAATTGTCACCGTACCTTTAAATCTCAACTGTATTTTTTATGTTTCTTTGCTTGACTGCTTGACTAGCAGGAGTTAGCTGTGTATTGTCAGCTAATGTGTACGGAAGAGAAAAGAAACCCTTTAATTATCTGCACATGCTTGTGAATTGTGgtattattcaagagtgtaatatggtttggcTGCATTATTCAACTGTGTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003040 True 297 lncRNA 0.33 1 34399060 34399356

Neighbor

gene id symbol gene type direction distance location
LOC110533701 LOC106603576 coding upstream 1826 34391710 ~ 34397234 (+)
LOC110533700 LOC106603575 coding upstream 7613 34387742 ~ 34391447 (+)
med31 med31 coding upstream 12004 34380235 ~ 34387056 (+)
LOC110533696 slc13a5 coding upstream 21120 34366052 ~ 34377940 (+)
LOC110533694 LOC106603569 coding upstream 76528 34299393 ~ 34322532 (+)
hsd20b2 LOC106603577 coding downstream 23182 34422538 ~ 34435620 (+)
LOC110533705 LOC106603578 coding downstream 37770 34437126 ~ 34443357 (+)
rnasekb rnasek coding downstream 59413 34458769 ~ 34472268 (+)
LOC110534915 rps17 coding downstream 87356 34486712 ~ 34488757 (+)
taf9 LOC106603584 coding downstream 129364 34528720 ~ 34535561 (+)
G881504 NA non-coding upstream 1279 34397525 ~ 34397781 (+)
G881498 NA non-coding upstream 33116 34364713 ~ 34365944 (+)
G881499 NA non-coding upstream 35062 34363766 ~ 34363998 (+)
G881488 NA non-coding upstream 65594 34333060 ~ 34333466 (+)
G881531 LOC100194703 non-coding downstream 95199 34494555 ~ 34562820 (+)
G881606 NA non-coding downstream 198771 34598127 ~ 34598341 (+)
G881607 NA non-coding downstream 200183 34599539 ~ 34600021 (+)
G881633 NA non-coding downstream 249191 34648547 ~ 34648928 (+)
LOC110533716 LOC106603589 non-coding downstream 274614 34622408 ~ 34674877 (+)
LOC110533688 NA other upstream 351336 34044472 ~ 34047724 (+)
G880069 NA other upstream 1097322 33300765 ~ 33301738 (+)
LOC110533672 LOC106603547 other upstream 1264146 33130843 ~ 33140211 (+)
LOC110533671 LOC106603546 other upstream 1353561 32981866 ~ 33045499 (+)
LOC110534883 med13 other upstream 3076460 31241426 ~ 31382578 (+)
G881536 NA other downstream 90464 34489820 ~ 34494101 (+)

Expression


Co-expression Network