G881845


Basic Information

Item Value
gene id G881845
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 34514141 ~ 34515889 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1003412
gcctcttggacctagactaggcgctccggtaccgctttccatgcggtagcagagagaacagtctttgactgggGTGGCTGTGGTTGTTGACTATTTTTatggcctttctctgacaccgcctggtgtagaggtcctggatggcatctTGTTTGAAAATAGAAGttgaaaccaggattcatccgtgaagaccacacttctccagtgtgccagtagCCATCGAATatcctcaaaaggttctacagctgcacccccgagagcactggttgcatcactgcctggaatggcaactgctcggcctccgaccacaaggcactacagagtgtgtgtgtatggcccagtacgtcattaggaccaagcttcctgccatccaggatgtctatatcaggcggtgtcagaggaagctctaaaaattgtcaaagactccagccaccct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1003412 True 433 lncRNA 0.52 3 34514141 34515889

Neighbor

gene id symbol gene type direction distance location
LOC100335039 LOC100335039 coding downstream 5368 34494606 ~ 34560547 (-)
c10h17orf49 cssa04h17orf49 coding downstream 54640 34443569 ~ 34459501 (-)
LOC110533697 LOC106603572 coding downstream 150769 34356495 ~ 34363372 (-)
serpinf1 LOC106603571 coding downstream 157937 34349523 ~ 34356204 (-)
LOC110533693 NA coding downstream 243489 34269661 ~ 34270652 (-)
ap4m1 ap4m1 coding upstream 5341 34521230 ~ 34528777 (-)
LOC110533714 rbmx2 coding upstream 73828 34589717 ~ 34596263 (-)
LOC110534894 gpr119 coding upstream 81358 34597247 ~ 34599007 (-)
LOC110533718 LOC106603592 coding upstream 375170 34891059 ~ 34893957 (-)
LOC118936924 NA coding upstream 409042 34924931 ~ 34925923 (-)
G881830 rps17 non-coding downstream 25428 34486833 ~ 34488713 (-)
G881802 NA non-coding downstream 78315 34435625 ~ 34435826 (-)
G881791 NA non-coding downstream 94880 34417974 ~ 34419261 (-)
G881789 NA non-coding downstream 109051 34404728 ~ 34405090 (-)
G881781 NA non-coding downstream 120067 34391891 ~ 34394074 (-)
G881883 NA non-coding upstream 80515 34596404 ~ 34596659 (-)
G881884 NA non-coding upstream 80946 34596835 ~ 34597124 (-)
G881897 NA non-coding upstream 93919 34609808 ~ 34610012 (-)
G881905 NA non-coding upstream 101709 34617598 ~ 34621386 (-)
G881916 NA non-coding upstream 120529 34636418 ~ 34636900 (-)
G881778 NA other downstream 96880 34413063 ~ 34417261 (-)
LOC110533687 NA other downstream 540829 33939072 ~ 33973312 (-)
G880994 NA other downstream 835302 33613325 ~ 33678839 (-)
LOC110533673 NA other downstream 1262620 33153970 ~ 33251521 (-)
G882578 NA other upstream 787025 35302914 ~ 35304055 (-)
G882539 NA other upstream 804925 35320814 ~ 35321706 (-)

Expression


Co-expression Network